RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 Q6ZT83 130 aa9.09□□□□□ -0.95
RDH11-210ENST00000557331 IKBIPQ70UQ0 350 aa9.09□□□□□ -0.95
RDH11-210ENST00000557331 LILRA2Q8N149 483 aa9.09□□□□□ -0.95
RDH11-210ENST00000557331 METTL6Q8TCB7 284 aa9.09□□□□□ -0.95
RDH11-210ENST00000557331 RNF128Q8TEB7 428 aa9.09□□□□□ -0.95
RDH11-210ENST00000557331 ELP4Q96EB1 424 aa9.09□□□□□ -0.95
RDH11-210ENST00000557331 KLHL15Q96M94 604 aa9.09□□□□□ -0.95
RDH11-210ENST00000557331 NSUN5Q96P11 429 aaKnown RBP9.09□□□□□ -0.95
RDH11-210ENST00000557331 ZNF382Q96SR6 550 aa9.09□□□□□ -0.95
RDH11-210ENST00000557331 DPH5Q9H2P9 285 aa9.09□□□□□ -0.95
RDH11-210ENST00000557331 ANKRA2Q9H9E1 313 aa9.09□□□□□ -0.95
RDH11-210ENST00000557331 UBQLN4Q9NRR5 601 aa9.09□□□□□ -0.95
RDH11-210ENST00000557331 FARSBQ9NSD9 589 aaKnown RBP9.09□□□□□ -0.95
RDH11-210ENST00000557331 CBLN4Q9NTU7 201 aa9.09□□□□□ -0.95
RDH11-210ENST00000557331 KLHL9Q9P2J3 617 aa9.09□□□□□ -0.95
RDH11-210ENST00000557331 CLEC4AQ9UMR7 237 aa9.09□□□□□ -0.95
RDH11-210ENST00000557331 VDAC3Q9Y277 283 aa9.09□□□□□ -0.95
RDH11-210ENST00000557331 GOLGA8QA0A0J9YX86 632 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 A0A1W2PQD3 144 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 A0A1W2PRB8 838 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 HMX2A2RU54 273 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 FAM234BA2RU67 622 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 GOLGA8OA6NCC3 632 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 GOLGA8NF8WBI6 632 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 GOLGA8RI6L899 631 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 UPK1AO00322 258 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 UBFD1O14562 309 aaKnown RBP9.08□□□□□ -0.96
RDH11-210ENST00000557331 TNFSF11O14788 317 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 SSX4O60224 188 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 INHBAP08476 426 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 SRD5A1P18405 259 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 PTAFRP25105 342 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 PSMA4P25789 261 aaKnown RBP9.08□□□□□ -0.96
RDH11-210ENST00000557331 HMOX2P30519 316 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 GABRA3P34903 492 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 HSD17B3P37058 310 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 GZMKP49863 264 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 PKNOX1P55347 436 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 C2orf80Q0P641 193 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 FAPQ12884 760 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 PPA1Q15181 289 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 UAP1Q16222 522 aaPredicted RBP9.08□□□□□ -0.96
RDH11-210ENST00000557331 GLE1Q53GS7 698 aaKnown RBP9.08□□□□□ -0.96
RDH11-210ENST00000557331 ARL13AQ5H913 290 aaPredicted RBP9.08□□□□□ -0.96
RDH11-210ENST00000557331 ALKBH2Q6NS38 261 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 MFSD12Q6NUT3 480 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 KLHL17Q6TDP4 642 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 TMEM108Q6UXF1 575 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 GPRIN3Q6ZVF9 776 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 BHLHA15Q7RTS1 189 aaPredicted RBP9.08□□□□□ -0.96
RDH11-210ENST00000557331 MTERF4Q7Z6M4 381 aaKnown RBP9.08□□□□□ -0.96
RDH11-210ENST00000557331 BANPQ8N9N5 519 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 CDRT4Q8N9R6 151 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 FBXO25Q8TCJ0 367 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 HOXD1Q9GZZ0 328 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 ACSS3Q9H6R3 686 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 C12orf49Q9H741 205 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 MED17Q9NVC6 651 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 GRHL1Q9NZI5 618 aa9.08□□□□□ -0.96
RDH11-210ENST00000557331 DMGDHQ9UI17 866 aaKnown RBP9.08□□□□□ -0.96
RDH11-210ENST00000557331 A0A0J9YW62 118 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 DPRXA6NFQ7 191 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 H3BNH8 94 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 H7C417 338 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 NDUFS8O00217 210 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 SCDO00767 359 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 LMX1BO60663 402 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 ADAP00813 363 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 CD8AP01732 235 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 JUNP05412 331 aaKnown RBP9.07□□□□□ -0.96
RDH11-210ENST00000557331 PRPS2P11908 318 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 GGT1P19440 569 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 TTKP33981 857 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 MAGEA12P43365 314 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 RFX3P48380 749 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 MANFP55145 182 aaKnown RBP9.07□□□□□ -0.96
RDH11-210ENST00000557331 CDH11P55287 796 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 CDH13P55290 713 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 SUMO3P55854 103 aaPredicted RBP9.07□□□□□ -0.96
RDH11-210ENST00000557331 CHRNB3Q05901 458 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 SLC18A2Q05940 514 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 ZNF239Q16600 458 aaKnown RBP9.07□□□□□ -0.96
RDH11-210ENST00000557331 PLPPR5Q32ZL2 321 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 GRAMD1BQ3KR37 738 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 ZNF544Q6NX49 715 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 TMEM107Q6UX40 140 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 FCRLAQ7L513 359 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 SLC22A9Q8IVM8 553 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 FBXL14Q8N1E6 418 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 PLD6Q8N2A8 252 aaKnown RBP9.07□□□□□ -0.96
RDH11-210ENST00000557331 ZNF527Q8NB42 609 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 ZNF540Q8NDQ6 660 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 SPATA4Q8NEY3 305 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 B4GALNT2Q8NHY0 566 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 ZFP28Q8NHY6 868 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 GPR151Q8TDV0 419 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 FAM168AQ92567 244 aa9.07□□□□□ -0.96
RDH11-210ENST00000557331 HOXB13Q92826 284 aaPredicted RBP9.07□□□□□ -0.96
RDH11-210ENST00000557331 ZNF764Q96H86 408 aaPredicted RBP9.07□□□□□ -0.96
RDH11-210ENST00000557331 RNF145Q96MT1 663 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms