RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SNX6Q9UNH7 406 aa4.39□□□□□ -1.71
ATXN3-246ENST00000557030 POFUT2Q9Y2G5 429 aa4.39□□□□□ -1.71
ATXN3-246ENST00000557030 CCL27Q9Y4X3 112 aa4.39□□□□□ -1.71
ATXN3-246ENST00000557030 VCANP13611 3396 aa4.39□□□□□ -1.71
ATXN3-246ENST00000557030 MYO18AQ92614 2054 aaKnown RBP4.39□□□□□ -1.71
ATXN3-246ENST00000557030 NYNRINQ9P2P1 1898 aaKnown RBP4.39□□□□□ -1.71
ATXN3-246ENST00000557030 TDRD15B5MCY1 1934 aaKnown RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 MYLKQ15746 1914 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 KIAA0100Q14667 2235 aaKnown RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 NUP205Q92621 2012 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 NOTCH4Q99466 2003 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 OR6C68A6NDL8 312 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 EFCAB10A6NFE3 127 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 CENPXA8MT69 81 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 RFXANKO14593 260 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 KMOO15229 486 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 KDELR3O43731 214 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 SCO2O43819 266 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 MITFO75030 526 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 TRIM3O75382 744 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 CLDN11O75508 207 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 WBP4O75554 376 aaKnown RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 UGT2B17O75795 530 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 PGLSO95336 258 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 CLDN9O95484 217 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 IGLV3-27P01718 113 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 CDK1P06493 297 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 ANXA5P08758 320 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 ITGA2P17301 1181 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 CTPS1P17812 591 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 TCEA1P23193 301 aaKnown RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 GADD45AP24522 165 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 HOXA9P31269 272 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 KDELR2P33947 212 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 DDOSTP39656 456 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 HNF4AP41235 474 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 SLC15A1P46059 708 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 OR1G1P47890 313 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 MTNR1AP48039 350 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 CDH4P55283 916 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 CDC42P60953 191 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 RPP38P78345 283 aaKnown RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 PLIN5Q00G26 463 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 IFITM2Q01629 132 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 PTPRCAPQ14761 206 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 CDK10Q15131 360 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 SF3B4Q15427 424 aaKnown RBP eCLIP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 DUOXA1Q1HG43 343 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 ZFP69Q49AA0 526 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 CARD16Q5EG05 197 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 DCAF12L2Q5VW00 463 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 XKRXQ6PP77 449 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 SUSD1Q6UWL2 747 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 SBSNQ6UWP8 590 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 GDPGP1Q6ZNW5 385 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 FAM92BQ6ZTR7 304 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 SLC24A5Q71RS6 500 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 CHST9Q7L1S5 443 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 LRRC70Q7Z2Q7 622 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 CCDC190Q86UF4 302 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 CYP4Z1Q86W10 505 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 RNF130Q86XS8 419 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 RAB43Q86YS6 212 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 SNX29P2Q8IUI4 249 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 ENTHD1Q8IYW4 607 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 METTL4Q8N3J2 472 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 STX19Q8N4C7 294 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 DNAJC22Q8N4W6 341 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 PARP16Q8N5Y8 322 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 C1orf52Q8N6N3 182 aaKnown RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 LPCAT1Q8NF37 534 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 ZNF675Q8TD23 568 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 ATOH1Q92858 354 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 IGSF8Q969P0 613 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 FBXO32Q969P5 355 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 RNF125Q96EQ8 232 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 METTL2AQ96IZ6 378 aaKnown RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 APOLD1Q96LR9 279 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 CASD1Q96PB1 797 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 SLC30A2Q9BRI3 323 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 HIPK2Q9H2X6 1198 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 TMEM245Q9H330 911 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 IKZF5Q9H5V7 419 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 ZNF556Q9HAH1 456 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 C3orf14Q9HBI5 128 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 ZBTB20Q9HC78 741 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 LTB4R2Q9NPC1 389 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 POLE4Q9NR33 117 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 DDX28Q9NUL7 540 aaKnown RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 FAM120CQ9NX05 1096 aaKnown RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 THUMPD1Q9NXG2 353 aaKnown RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 VNN3Q9NY84 501 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 AGO1Q9UL18 857 aaKnown RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 ABCG2Q9UNQ0 655 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 SATB2Q9UPW6 733 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 OSGIN2Q9Y236 505 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 RBMX2Q9Y388 322 aaKnown RBP4.38□□□□□ -1.71
ATXN3-246ENST00000557030 U3KQV3 271 aa4.38□□□□□ -1.71
ATXN3-246ENST00000557030 SHROOM3Q8TF72 1996 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms