RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 UBQLNLQ8IYU4 475 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 C4orf32Q8N8J7 132 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 PRSS33Q8NF86 280 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 OR13C2Q8NGS9 318 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 MIPOL1Q8TD10 442 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 TBCKQ8TEA7 893 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 IL1F10Q8WWZ1 152 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 CRYGNQ8WXF5 182 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 C18orf25Q96B23 403 aaPredicted RBP3.5□□□□□ -1.85
PRPF39-210ENST00000556718 C11orf24Q96F05 449 aaPredicted RBP3.5□□□□□ -1.85
PRPF39-210ENST00000556718 C9orf85Q96MD7 179 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 RIT2Q99578 217 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 SH3GL3Q99963 347 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 GCOM2Q9BZD3 368 aaPredicted RBP3.5□□□□□ -1.85
PRPF39-210ENST00000556718 POLR3FQ9H1D9 316 aaPredicted RBP3.5□□□□□ -1.85
PRPF39-210ENST00000556718 RHOJQ9H4E5 214 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 APMAPQ9HDC9 416 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 ELOVL2Q9NXB9 296 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 DCAF16Q9NXF7 216 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 UTP6Q9NYH9 597 aaKnown RBP3.5□□□□□ -1.85
PRPF39-210ENST00000556718 CTSZQ9UBR2 303 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 MLXQ9UH92 298 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 CLEC4AQ9UMR7 237 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 ABCA5Q8WWZ7 1642 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 ATP10DQ9P241 1426 aa3.5□□□□□ -1.85
PRPF39-210ENST00000556718 CFAP65Q6ZU64 1925 aaKnown RBP3.5□□□□□ -1.85
PRPF39-210ENST00000556718 ELP1O95163 1332 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 ZSCAN5CA6NGD5 496 aaPredicted RBP3.49□□□□□ -1.85
PRPF39-210ENST00000556718 GOLGA6L10A6NI86 522 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 OR6C65A6NJZ3 312 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 NPIPA7E9PJI5 369 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 ZNF208O43345 1280 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 NEBLO76041 1014 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 LRATO95237 230 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 JCHAINP01591 159 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 HCKP08631 526 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 HSMCR30P0CW71 290 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 NPIPA8P0DM63 369 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 PVRP15151 417 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 HNF1AP20823 631 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 TBXA2RP21731 343 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 PBLDP30039 288 aaPredicted RBP3.49□□□□□ -1.85
PRPF39-210ENST00000556718 NF2P35240 595 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 PTGER3P43115 390 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 NOVA1P51513 510 aaKnown RBP3.49□□□□□ -1.85
PRPF39-210ENST00000556718 AIF1P55008 147 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 OTUD4Q01804 1114 aaKnown RBP3.49□□□□□ -1.85
PRPF39-210ENST00000556718 ZNF33BQ06732 778 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 DDX39BQ13838 428 aaKnown RBP3.49□□□□□ -1.85
PRPF39-210ENST00000556718 CRMP1Q14194 572 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 GANABQ14697 944 aaKnown RBP3.49□□□□□ -1.85
PRPF39-210ENST00000556718 SYPL1Q16563 259 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 LPAL2Q16609 132 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 PCK2Q16822 640 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 TMEM44Q2T9K0 475 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 RABL6Q3YEC7 729 aaPredicted RBP3.49□□□□□ -1.85
PRPF39-210ENST00000556718 BOLA3Q53S33 107 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 CCDC183Q5T5S1 534 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 C9orf66Q5T8R8 295 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 LGSNQ5TDP6 509 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 DOK6Q6PKX4 331 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 SYT10Q6XYQ8 523 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 Q6ZPB1 254 aaPredicted RBP3.49□□□□□ -1.85
PRPF39-210ENST00000556718 APTXQ7Z2E3 356 aaKnown RBP3.49□□□□□ -1.85
PRPF39-210ENST00000556718 EFL1Q7Z2Z2 1120 aaKnown RBP3.49□□□□□ -1.85
PRPF39-210ENST00000556718 CCDC50Q8IVM0 306 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 ZNF491Q8N8L2 437 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 BHLHE23Q8NDY6 225 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 CNIH3Q8TBE1 160 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 NANPQ8TBE9 248 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 FNDC8Q8TC99 324 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 EMG1Q92979 244 aaKnown RBP3.49□□□□□ -1.85
PRPF39-210ENST00000556718 TUBGCP3Q96CW5 907 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 MOCOSQ96EN8 888 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 PSKH2Q96QS6 385 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 SECISBP2Q96T21 854 aaKnown RBP3.49□□□□□ -1.85
PRPF39-210ENST00000556718 DUSP16Q9BY84 665 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 HEXA-AS1Q9H8Q6 139 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 MEAF6Q9HAF1 191 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 EXOSC3Q9NQT5 275 aaKnown RBP3.49□□□□□ -1.85
PRPF39-210ENST00000556718 SENP1Q9P0U3 644 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 ANAPC7Q9UJX3 599 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 NPIPA1Q9UND3 350 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 RNF24Q9Y225 148 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 NTNG1Q9Y2I2 539 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 MOB4Q9Y3A3 225 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 ATP6V1DQ9Y5K8 247 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 NCOA3Q9Y6Q9 1424 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 KANK1Q14678 1352 aa3.49□□□□□ -1.85
PRPF39-210ENST00000556718 POLA1P09884 1462 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-210ENST00000556718 IGHV3OR16-12A0A075B7B8 117 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 METTL21EPA6NDL7 271 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 H0Y8G0 127 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 H7C423 109 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 ARPC3O15145 178 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 LRRTM2O43300 516 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 TSC22D2O75157 780 aa3.48□□□□□ -1.85
PRPF39-210ENST00000556718 SNNO75324 88 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-210ENST00000556718 SURF6O75683 361 aaKnown RBP3.48□□□□□ -1.85
PRPF39-210ENST00000556718 IGF1P05019 195 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms