RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 FAM183AA6NL82 134 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 AQP9O43315 295 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 COQ9O75208 318 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 RFPL3O75679 317 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 OCM2P0CE71 109 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 OCMP0CE72 109 aaPredicted RBP9.37□□□□□ -0.91
TMEM260-211ENST00000556648 IFI30P13284 250 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 ZNF12P17014 697 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 ENDOUP21128 410 aaKnown RBP9.37□□□□□ -0.91
TMEM260-211ENST00000556648 CRYBB2P43320 205 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 RANBP1P43487 201 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 CSNK1EP49674 416 aaKnown RBP9.37□□□□□ -0.91
TMEM260-211ENST00000556648 PGDP52209 483 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 CDH11P55287 796 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 STX4Q12846 297 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 ZNF267Q14586 743 aaPredicted RBP9.37□□□□□ -0.91
TMEM260-211ENST00000556648 PHC2Q8IXK0 858 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 ZFP41Q8N8Y5 198 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 PROKR2Q8NFJ6 384 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 OR4F15Q8NGB8 312 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 FANK1Q8TC84 345 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 TMEM239Q8WW34 195 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 TM9SF4Q92544 642 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 OSTF1Q92882 214 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 RIT1Q92963 219 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 MMABQ96EY8 250 aaPredicted RBP9.37□□□□□ -0.91
TMEM260-211ENST00000556648 TCTN2Q96GX1 697 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 VSTM2LQ96N03 204 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 LMF1Q96S06 567 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 KCNS3Q9BQ31 491 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 MED20Q9H944 212 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 HINT3Q9NQE9 182 aaKnown RBP9.37□□□□□ -0.91
TMEM260-211ENST00000556648 PRTFDC1Q9NRG1 225 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 QPCTLQ9NXS2 382 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 IL20Q9NYY1 176 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 DAPK2Q9UIK4 370 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 MAU2Q9Y6X3 613 aa9.37□□□□□ -0.91
TMEM260-211ENST00000556648 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 AK1P00568 194 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 CLPSP04118 112 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 GCGRP47871 477 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 NXPH1P58417 271 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 RPS25P62851 125 aaKnown RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 IGLV3-21P80748 117 aaPredicted RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 CSTF1Q05048 431 aaKnown RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 C3orf38Q5JPI3 329 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 PRAMEF17Q5VTA0 474 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 RNLSQ5VYX0 342 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 THSD4Q6ZMP0 1018 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 C17orf82Q86X59 251 aaPredicted RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 FAM83FQ8NEG4 500 aaPredicted RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 GATAD2BQ8WXI9 593 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 TMEM203Q969S6 136 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 ZNF285Q96NJ3 590 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 HCAR1Q9BXC0 346 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 ASPNQ9BXN1 380 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 BARHL1Q9BZE3 327 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 RACGAP1Q9H0H5 632 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 MMP27Q9H306 513 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 OR52D1Q9H346 318 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 UBQLN3Q9H347 655 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 FGF20Q9NP95 211 aaPredicted RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 NDUFB11Q9NX14 153 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 DNAJB12Q9NXW2 375 aaKnown RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 ERVK-19Q9WJR5 959 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 RNF215Q9Y6U7 377 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 CEP192Q8TEP8 1941 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 ABCA7Q8IZY2 2146 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 EML5Q05BV3 1969 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 SOX1O00570 391 aaPredicted RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 GNB5O14775 395 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 CTNSO60931 367 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 NSA2O95478 260 aaKnown RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 NGFRP08138 427 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 IFI6P09912 130 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 LIMS3P0CW19 117 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 LIMS4P0CW20 117 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 TBXA2RP21731 343 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 ACAA2P42765 397 aaKnown RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 MTNR1AP48039 350 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 RACK1P63244 317 aaKnown RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 DMWDQ09019 674 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 RAB40BQ12829 278 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 MLLT11Q13015 90 aaPredicted RBP9.36□□□□□ -0.91
TMEM260-211ENST00000556648 SLC35F1Q5T1Q4 408 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 FCRLBQ6BAA4 426 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 LINC00299Q6ZSB3 139 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 LHFPL3Q86UP9 236 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 SIX5Q8N196 739 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 AMER2Q8N7J2 671 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 ZNF321PQ8N8H1 164 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 RCBTB1Q8NDN9 531 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 OTULINQ96BN8 352 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 DGAT2Q96PD7 388 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 NELL2Q99435 816 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 CHRDQ9H2X0 955 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 RERGLQ9H628 205 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 UCK1Q9HA47 277 aa9.36□□□□□ -0.91
TMEM260-211ENST00000556648 MEPEQ9NQ76 525 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms