RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 TMBIM1Q969X1 311 aa9.01□□□□□ -0.97
SCFD1-220ENST00000556486 KLHL29Q96CT2 875 aa9.01□□□□□ -0.97
SCFD1-220ENST00000556486 ZNF382Q96SR6 550 aa9.01□□□□□ -0.97
SCFD1-220ENST00000556486 STMN4Q9H169 189 aaPredicted RBP9.01□□□□□ -0.97
SCFD1-220ENST00000556486 SIRT5Q9NXA8 310 aa9.01□□□□□ -0.97
SCFD1-220ENST00000556486 ZNF780BQ9Y6R6 833 aa9.01□□□□□ -0.97
SCFD1-220ENST00000556486 ROS1P08922 2347 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 A0A1W2PNV4 684 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 B4DXG7 233 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 PPP6CO00743 305 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 CRYGSP22914 178 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 CASQ1P31415 396 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 HSD17B3P37058 310 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 MC3RP41968 323 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 KCNJ5P48544 419 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 DIO3P55073 304 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 B3GALT5-AS1P59052 145 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 SIRPAP78324 504 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 MRPS22P82650 360 aaKnown RBP9□□□□□ -0.97
SCFD1-220ENST00000556486 MRPS35P82673 323 aaKnown RBP9□□□□□ -0.97
SCFD1-220ENST00000556486 RASA2Q15283 850 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 LTB4RQ15722 352 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 UAP1Q16222 522 aaPredicted RBP9□□□□□ -0.97
SCFD1-220ENST00000556486 CYP27C1Q4G0S4 372 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 UBAP2Q5T6F2 1119 aaKnown RBP9□□□□□ -0.97
SCFD1-220ENST00000556486 OR2A2Q6IF42 318 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 C8orf74Q6P047 294 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 CYP2R1Q6VVX0 501 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 BEND4Q6ZU67 534 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 FADS6Q8N9I5 356 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 TMEM171Q8WVE6 324 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 PAFAH2Q99487 392 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 CDC42EP4Q9H3Q1 356 aaKnown RBP9□□□□□ -0.97
SCFD1-220ENST00000556486 ZNF226Q9NYT6 803 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 HEY2Q9UBP5 337 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 FBXL2Q9UKC9 423 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 UTS2RQ9UKP6 389 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 ABCA1O95477 2261 aa9□□□□□ -0.97
SCFD1-220ENST00000556486 A0A087WV62 115 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 MANBAO00462 879 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 REM1O75628 298 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 PSMG1O95456 288 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 TGM6O95932 706 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 KRT6AP02538 564 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 KRT6BP04259 564 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 IFI6P09912 130 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 CD40P25942 277 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 CD79BP40259 229 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 KRT6CP48668 564 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 CDH13P55290 713 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 DSCR4P56555 118 aaPredicted RBP8.99□□□□□ -0.97
SCFD1-220ENST00000556486 CORO7P57737 925 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 RAE1P78406 368 aaKnown RBP8.99□□□□□ -0.97
SCFD1-220ENST00000556486 PSG6Q00889 435 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 CKAP4Q07065 602 aaKnown RBP8.99□□□□□ -0.97
SCFD1-220ENST00000556486 GANABQ14697 944 aaKnown RBP8.99□□□□□ -0.97
SCFD1-220ENST00000556486 HEPACAMQ14CZ8 416 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 GUSBP1Q15486 140 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 CHRFAM7AQ494W8 412 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 SPIN4Q56A73 249 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 SGO1Q5FBB7 561 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 ZNF474Q6S9Z5 364 aaPredicted RBP8.99□□□□□ -0.97
SCFD1-220ENST00000556486 NPSR1Q6W5P4 371 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 TIFABQ6ZNK6 161 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 HIPK1Q86Z02 1210 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 GRAMD2AQ8IUY3 354 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 CNPY4Q8N129 248 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 DCAKDQ8WVC6 231 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 STARD4Q96DR4 205 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 MARK4Q96L34 752 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 SFXN2Q96NB2 322 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 ADOQ96SZ5 270 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 REG4Q9BYZ8 158 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 ACPTQ9BZG2 426 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 SLC35C2Q9NQQ7 365 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 TAS2R7Q9NYW3 318 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 NFU1Q9UMS0 254 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 ABCG2Q9UNQ0 655 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 LAMP3Q9UQV4 416 aa8.99□□□□□ -0.97
SCFD1-220ENST00000556486 HMGB1P1B2RPK0 211 aaPredicted RBP8.98□□□□□ -0.97
SCFD1-220ENST00000556486 TRIM49D1C9J1S8 452 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 SCDO00767 359 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 EMC8O43402 210 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 PCDH7O60245 1069 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 GPRIN2O60269 458 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 FADS1O60427 444 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 SOX30O94993 753 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 OR4F21O95013 312 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 IL3P08700 152 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 CTAGE8P0CG41 777 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 CD8BP10966 210 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 PEPDP12955 493 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 POU2F1P14859 743 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 RHCEP18577 417 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 DPP4P27487 766 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 ECHS1P30084 290 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 TIA1P31483 386 aaKnown RBP eCLIP8.98□□□□□ -0.97
SCFD1-220ENST00000556486 MPIP34949 423 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 KRT20P35900 424 aa8.98□□□□□ -0.97
SCFD1-220ENST00000556486 UGT2B10P36537 528 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms