RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ANKRD54Q6NXT1 300 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 ZFP1Q6P2D0 407 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 PRMT9Q6P2P2 845 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 HACD2Q6Y1H2 254 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 ZBTB49Q6ZSB9 765 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 ADGRD2Q7Z7M1 963 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 DEFB107AQ8IZN7 70 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 PELI3Q8N2H9 469 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 OR52L2PQ8NGH6 319 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 OR56B1Q8NGI3 324 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 TRPC4APQ8TEL6 797 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 AGAP11Q8TF27 550 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 TWIST2Q8WVJ9 160 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 ASZ1Q8WWH4 475 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 SUSD6Q92537 303 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 FIG4Q92562 907 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 FGF13Q92913 245 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 RPL36ALQ969Q0 106 aaKnown RBP4.76□□□□□ -1.65
SRP54-211ENST00000556445 ELSPBP1Q96BH3 223 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 MOAP1Q96BY2 351 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 ROPN1LQ96C74 230 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 PPP3R2Q96LZ3 170 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 FOPNLQ96NB1 174 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 CATSPER2Q96P56 530 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 FYTTD1Q96QD9 318 aaKnown RBP4.76□□□□□ -1.65
SRP54-211ENST00000556445 GPA33Q99795 319 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 NTMT1Q9BV86 223 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 ELOVL1Q9BW60 279 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 SHCBP1LQ9BZQ2 653 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 UBQLN3Q9H347 655 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 KCNK15Q9H427 330 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 ZNF385DQ9H6B1 395 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 WDR55Q9H6Y2 383 aaPredicted RBP4.76□□□□□ -1.65
SRP54-211ENST00000556445 EXO5Q9H790 373 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 PARVBQ9HBI1 364 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 SLCO1C1Q9NYB5 712 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 WWOXQ9NZC7 414 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 STX18Q9P2W9 335 aaKnown RBP4.76□□□□□ -1.65
SRP54-211ENST00000556445 OPTCQ9UBM4 332 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 NDUFAF1Q9Y375 327 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 FIS1Q9Y3D6 152 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 AP4B1Q9Y6B7 739 aa4.76□□□□□ -1.65
SRP54-211ENST00000556445 KIF26AQ9ULI4 1882 aaPredicted RBP4.75□□□□□ -1.65
SRP54-211ENST00000556445 MYO7AQ13402 2215 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 ANKDD1BA6NHY2 528 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 LGALS8O00214 317 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 AIM2O14862 343 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 LIN7AO14910 233 aaPredicted RBP4.75□□□□□ -1.65
SRP54-211ENST00000556445 RGS14O43566 566 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 CIDEAO60543 219 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 UGDHO60701 494 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 RSL1D1O76021 490 aaKnown RBP4.75□□□□□ -1.65
SRP54-211ENST00000556445 PSMG1O95456 288 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 KRT6AP02538 564 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 CATP04040 527 aaKnown RBP4.75□□□□□ -1.65
SRP54-211ENST00000556445 CALCBP10092 127 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 MYOGP15173 224 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 CKMT2P17540 419 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 PSMC3P17980 439 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 ITGAXP20702 1163 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 LHCGRP22888 699 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 AKT2P31751 481 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 CAPGP40121 348 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 TNFRSF4P43489 277 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 NUDT2P50583 147 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 HNRNPFP52597 415 aaKnown RBP4.75□□□□□ -1.65
SRP54-211ENST00000556445 KCNK10P57789 538 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 ERVK-8P63133 956 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 FOXM1Q08050 763 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 FCHO2Q0JRZ9 810 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 TRAP1Q12931 704 aaKnown RBP4.75□□□□□ -1.65
SRP54-211ENST00000556445 DNASE1L3Q13609 305 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 GTF2H2Q13888 395 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 RPE65Q16518 533 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 PPP1R3AQ16821 1122 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 ITPRIPL2Q3MIP1 535 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 UGT3A2Q3SY77 523 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 GGTA1PQ4G0N0 100 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 TMEM52BQ4KMG9 183 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 SYTL3Q4VX76 610 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 ATP6AP1LQ52LC2 224 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 AGKQ53H12 422 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 C9orf50Q5SZB4 431 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 TMEM215Q68D42 235 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 GTF2H2CQ6P1K8 395 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 FAM198BQ6UWH4 519 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 SBSNQ6UWP8 590 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 CYHR1Q6ZMK1 362 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 ZNF813Q6ZN06 617 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 DET1Q7L5Y6 550 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 ARPINQ7Z6K5 226 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 TECPR1Q7Z6L1 1165 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 TMEM126BQ8IUX1 230 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 ZDHHC21Q8IVQ6 265 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.75□□□□□ -1.65
SRP54-211ENST00000556445 C12orf76Q8N812 135 aaPredicted RBP4.75□□□□□ -1.65
SRP54-211ENST00000556445 AMER3Q8N944 861 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 FADS6Q8N9I5 356 aa4.75□□□□□ -1.65
SRP54-211ENST00000556445 DNAAF1Q8NEP3 725 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms