RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 AXLP30530 894 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 FCGR2BP31994 310 aaPredicted RBP3.71□□□□□ -1.82
PRPF39-209ENST00000556353 FCGR2CP31995 323 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 NAMPTP43490 491 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 B2MP61769 119 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 MRPS15P82914 257 aaKnown RBP3.71□□□□□ -1.82
PRPF39-209ENST00000556353 TFDP1Q14186 410 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 SMUG1Q53HV7 270 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 PM20D1Q6GTS8 502 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 SLC39A4Q6P5W5 647 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 DHRS11Q6UWP2 260 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 SPATA21Q7Z572 469 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 PRUNE1Q86TP1 453 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 DND1Q8IYX4 353 aaKnown RBP3.71□□□□□ -1.82
PRPF39-209ENST00000556353 SPC24Q8NBT2 197 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 CNNM3Q8NE01 707 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 GOT1L1Q8NHS2 421 aaPredicted RBP3.71□□□□□ -1.82
PRPF39-209ENST00000556353 CCDC110Q8TBZ0 833 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 FGF13Q92913 245 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 TUBGCP3Q96CW5 907 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 RMDN1Q96DB5 314 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 CFAP57Q96MR6 1250 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 GTPBP2Q9BX10 602 aaKnown RBP3.71□□□□□ -1.82
PRPF39-209ENST00000556353 MFSD1Q9H3U5 465 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 MARCH7Q9H992 704 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 LIN28AQ9H9Z2 209 aaKnown RBP3.71□□□□□ -1.82
PRPF39-209ENST00000556353 TUFT1Q9NNX1 390 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 IARS2Q9NSE4 1012 aaKnown RBP3.71□□□□□ -1.82
PRPF39-209ENST00000556353 DDX19AQ9NUU7 478 aaKnown RBP3.71□□□□□ -1.82
PRPF39-209ENST00000556353 ATP6V1DQ9Y5K8 247 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 AP1M2Q9Y6Q5 423 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 PTPRQQ9UMZ3 2332 aa3.71□□□□□ -1.82
PRPF39-209ENST00000556353 PHLPP2Q6ZVD8 1323 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 PLXNB3Q9ULL4 1909 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 TLN1Q9Y490 2541 aaKnown RBP3.7□□□□□ -1.82
PRPF39-209ENST00000556353 SMIM28A0A1B0GU29 152 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 ARHGEF37A1IGU5 675 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 GOLGA6L4A6NEF3 574 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 OR6C65A6NJZ3 312 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 H3BMM5 538 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 HAT1O14929 419 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 SIGLEC5O15389 551 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 PRPSAP2O60256 369 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 SEC22BO75396 215 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 ADCY5O95622 1261 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 SP9P0CG40 484 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 TROVE2P10155 538 aaKnown RBP eCLIP3.7□□□□□ -1.82
PRPF39-209ENST00000556353 IDO1P14902 403 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 CD1DP15813 335 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 IL11P20809 199 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 IL10P22301 178 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 CPT2P23786 658 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 U2AF2P26368 475 aaKnown RBP eCLIP3.7□□□□□ -1.822e-8■■■□□ 15.9
PRPF39-209ENST00000556353 HOXA9P31269 272 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 RPL9P32969 192 aaKnown RBP3.7□□□□□ -1.82
PRPF39-209ENST00000556353 OR1D2P34982 312 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 TNFSF9P41273 254 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 HAAOP46952 286 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 FNTAP49354 379 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 STARD6P59095 220 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 OSTNP61366 133 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 BTG1P62324 171 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 PPIAP62937 165 aaKnown RBP3.7□□□□□ -1.82
PRPF39-209ENST00000556353 NDPQ00604 133 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 SPAG1Q07617 926 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 MAPRE2Q15555 327 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 DCAF4L1Q3SXM0 396 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 CCDC40Q4G0X9 1142 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 FBXO48Q5FWF7 155 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 FAM78AQ5JUQ0 283 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 ATF7IP2Q5U623 682 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 CST9LP1Q5W188 147 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 SLC8B1Q6J4K2 584 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 RPUSD3Q6P087 351 aaKnown RBP3.7□□□□□ -1.82
PRPF39-209ENST00000556353 EMBQ6PCB8 327 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 DCLRE1AQ6PJP8 1040 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 C6orf89Q6UWU4 347 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 FAM47EQ6ZV65 393 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 C1orf186Q6ZWK4 172 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 GPR65Q8IYL9 337 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 OR8H3Q8N146 312 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 ZBTB44Q8NCP5 570 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 TMEM161BQ8NDZ6 487 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 MRAPQ8TCY5 172 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 EXT2Q93063 718 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 SLC35B4Q969S0 331 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 C19orf60Q96EN9 201 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 C11orf24Q96F05 449 aaPredicted RBP3.7□□□□□ -1.82
PRPF39-209ENST00000556353 ZIM3Q96PE6 472 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 PSKH2Q96QS6 385 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 APOL2Q9BQE5 337 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 PRMT8Q9NR22 394 aaPredicted RBP3.7□□□□□ -1.82
PRPF39-209ENST00000556353 HEBP1Q9NRV9 189 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.7□□□□□ -1.82
PRPF39-209ENST00000556353 PHPT1Q9NRX4 125 aaPredicted RBP3.7□□□□□ -1.82
PRPF39-209ENST00000556353 GLRX2Q9NS18 164 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 HOMER3Q9NSC5 361 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 ANAPC11Q9NYG5 84 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 CDH7Q9ULB5 785 aa3.7□□□□□ -1.82
PRPF39-209ENST00000556353 PTPN13Q12923 2485 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms