RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TMCC2O75069 709 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 PROCP04070 461 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 PYGBP11216 843 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 PRPS2P11908 318 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 PRPH2P23942 346 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 EDNRAP25101 427 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 PSMD4P55036 377 aaKnown RBP12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 CTBP2P56545 445 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 PPP2R2BQ00005 443 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 PDE7AQ13946 482 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ZNHIT3Q15649 155 aaPredicted RBP12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ZNF239Q16600 458 aaKnown RBP12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 FIGNL1Q6PIW4 674 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 TFAP2EQ6VUC0 442 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ZYG11AQ6WRX3 759 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 Q6ZSR9 355 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 BEND4Q6ZU67 534 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ESPNLQ6ZVH7 1005 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 IKBIPQ70UQ0 350 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 WDR75Q8IWA0 830 aaKnown RBP12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 FBXO30Q8TB52 745 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GPR151Q8TDV0 419 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ACMSDQ8TDX5 336 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ABHD3Q8WU67 409 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ROBO4Q8WZ75 1007 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 S100PBPQ96BU1 408 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 OTUB1Q96FW1 271 aaPredicted RBP12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 C12orf65Q9H3J6 166 aaKnown RBP12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 CXorf56Q9H5V9 222 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 C12orf49Q9H741 205 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 SIRT3Q9NTG7 399 aaPredicted RBP12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 NFU1Q9UMS0 254 aa12.78□□□□□ -0.36
CHMP4BP1-201ENST00000556017 A0A1W2PPM1 405 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 RNF223E7ERA6 249 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 RIPK2O43353 540 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 NDUFS7O75251 213 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 KCNH1O95259 989 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 GSTA1P08263 222 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 SDC1P18827 310 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PRIM2P49643 509 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CLK3P49761 638 aaKnown RBP12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 MANFP55145 182 aaKnown RBP12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 TAB1Q15750 504 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 WHAMMP3Q1A5X7 153 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PGGHGQ32M88 737 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 NCMAPQ5T1S8 102 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CCNJQ5T5M9 372 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 HBMQ6B0K9 141 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CLEC6AQ6EIG7 209 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PPP4R4Q6NUP7 873 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CBLN3Q6UW01 205 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CCNYL1Q8N7R7 359 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 NUP43Q8NFH3 380 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 OSTF1Q92882 214 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ZBTB8AQ96BR9 441 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 SH3YL1Q96HL8 342 aaPredicted RBP12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PRRG4Q9BZD6 226 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 TUBB1Q9H4B7 451 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 COQ10BQ9H8M1 238 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 GLRX2Q9NS18 164 aa12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PAQR5Q9NXK6 330 aaPredicted RBP12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 MRTO4Q9UKD2 239 aaKnown RBP12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 MCTS1Q9ULC4 181 aaKnown RBP12.77□□□□□ -0.37
CHMP4BP1-201ENST00000556017 A0A096LNT2 108 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ZNF814B7Z6K7 855 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PDPK1O15530 556 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 URI1O94763 535 aaPredicted RBP12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PLGP00747 810 aaPredicted RBP12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CD8AP01732 235 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 TUBBP07437 444 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 FAM153BP0C7A2 387 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ZNF117Q03924 483 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 TOMM34Q15785 309 aaPredicted RBP12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 IMPG1Q17R60 797 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CLEC12BQ2HXU8 276 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 FAM153CQ494X1 144 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 HEPHL1Q6MZM0 1159 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 DNAJC14Q6Y2X3 702 aaPredicted RBP12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 TRABD2AQ86V40 505 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 TUSC5Q8IXB3 177 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CDRT4Q8N9R6 151 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 LRRN4CLQ8ND94 238 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 METTL2AQ96IZ6 378 aaKnown RBP12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 KLHL15Q96M94 604 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 C3orf14Q9HBI5 128 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 BAIAP2L1Q9UHR4 511 aa12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 MAGED1Q9Y5V3 778 aaPredicted RBP12.76□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ANK2Q01484 3957 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 A0A1W2PQD3 144 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CCDC151A5D8V7 595 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 DPRXA6NFQ7 191 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PLIN3O60664 434 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 SEC22BO75396 215 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 IGHV4-39P01824 125 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 EFNA1P20827 205 aaPredicted RBP12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 SFTPDP35247 375 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 ACVR1BP36896 505 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 CDKN1AP38936 164 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 PRKAG1P54619 331 aa12.75□□□□□ -0.37
CHMP4BP1-201ENST00000556017 DNAJB13P59910 316 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms