RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 AENQ8WTP8 325 aaKnown RBP3.41□□□□□ -1.86
KTN1-222ENST00000555506 IL1F10Q8WWZ1 152 aa3.41□□□□□ -1.86
KTN1-222ENST00000555506 EMG1Q92979 244 aaKnown RBP3.41□□□□□ -1.86
KTN1-222ENST00000555506 CCT7Q99832 543 aa3.41□□□□□ -1.86
KTN1-222ENST00000555506 TM2D1Q9BX74 207 aa3.41□□□□□ -1.86
KTN1-222ENST00000555506 VCX2Q9H322 139 aa3.41□□□□□ -1.86
KTN1-222ENST00000555506 LRRC40Q9H9A6 602 aa3.41□□□□□ -1.86
KTN1-222ENST00000555506 CLEC5AQ9NY25 188 aa3.41□□□□□ -1.86
KTN1-222ENST00000555506 COX16Q9P0S2 106 aa3.41□□□□□ -1.86
KTN1-222ENST00000555506 MAD1L1Q9Y6D9 718 aa3.41□□□□□ -1.86
KTN1-222ENST00000555506 SAGE2PA6NJ88 616 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 CCT8L1PA6NM43 557 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 EFCAB7A8K855 629 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 NPIPA7E9PJI5 369 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 SLC17A2O00624 439 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 CXCL11O14625 94 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 ARPC3O15145 178 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 TPST2O60704 377 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 SNNO75324 88 aaPredicted RBP3.4□□□□□ -1.87
KTN1-222ENST00000555506 RHBDL1O75783 438 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 HPP00738 406 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 NPIPA8P0DM63 369 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 FOLR2P14207 255 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 ZNF44P15621 663 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 HMGN5P82970 282 aaKnown RBP3.4□□□□□ -1.87
KTN1-222ENST00000555506 COX10Q12887 443 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 RIPK1Q13546 671 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 DPYSL3Q14195 570 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 MESDQ14696 234 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 SLC5A12Q1EHB4 618 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 GGTA1PQ4G0N0 100 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 FAM71F2Q6NXP2 309 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 ZNF679Q8IYX0 411 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 LINC01561Q8N1V8 128 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 STXBP6Q8NFX7 210 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 OR9A4Q8NGU2 314 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 TMEM80Q96HE8 168 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 SH3YL1Q96HL8 342 aaPredicted RBP3.4□□□□□ -1.87
KTN1-222ENST00000555506 PPP1R16AQ96I34 528 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 C7orf34Q96L11 122 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 C12orf66Q96MD2 445 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 AMDHD1Q96NU7 426 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 SLC6A7Q99884 636 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 PUS3Q9BZE2 481 aaKnown RBP3.4□□□□□ -1.87
KTN1-222ENST00000555506 APMAPQ9HDC9 416 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 CUTCQ9NTM9 273 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 SLC2A6Q9UGQ3 507 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 NPIPA1Q9UND3 350 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 RPH3ALQ9UNE2 315 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 SNED1Q8TER0 1413 aa3.4□□□□□ -1.87
KTN1-222ENST00000555506 FAM220BPB1ANY3 271 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 OR7A17O14581 309 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 MSH4O15457 936 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 PHF1O43189 567 aaPredicted RBP3.39□□□□□ -1.87
KTN1-222ENST00000555506 SLC2A10O95528 541 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 CD55P08174 381 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 CAPN2P17655 700 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 HPCAL1P37235 193 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 AP3M2P53677 418 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 ZFP36L1Q07352 338 aaKnown RBP3.39□□□□□ -1.87
KTN1-222ENST00000555506 RAB40BQ12829 278 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 C10orf120Q5SQS8 335 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 ZNF772Q68DY9 489 aaPredicted RBP3.39□□□□□ -1.87
KTN1-222ENST00000555506 TMEM225Q6GV28 225 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 PMF1Q6P1K2 205 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 FAHD2BQ6P2I3 314 aaPredicted RBP3.39□□□□□ -1.87
KTN1-222ENST00000555506 GCNT7Q6ZNI0 430 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 CSNK1A1LQ8N752 337 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 C15orf54Q8N8G6 183 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 EIF1ADQ8N9N8 165 aaKnown RBP3.39□□□□□ -1.87
KTN1-222ENST00000555506 OR2T33Q8NG76 320 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 N4BP2L2Q92802 583 aaPredicted RBP3.39□□□□□ -1.87
KTN1-222ENST00000555506 FAHD2AQ96GK7 314 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 PSKH2Q96QS6 385 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 ATOH8Q96SQ7 321 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 PNO1Q9NRX1 252 aaKnown RBP3.39□□□□□ -1.87
KTN1-222ENST00000555506 AIPL1Q9NZN9 384 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 PIPOXQ9P0Z9 390 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 ZNF221Q9UK13 617 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 OARD1Q9Y530 152 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 SLCO1B1Q9Y6L6 691 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 FRMPD4Q14CM0 1322 aa3.39□□□□□ -1.87
KTN1-222ENST00000555506 METTL21EPA6NDL7 271 aa3.38□□□□□ -1.87
KTN1-222ENST00000555506 GPRIN2O60269 458 aa3.38□□□□□ -1.87
KTN1-222ENST00000555506 PALMO75781 387 aa3.38□□□□□ -1.87
KTN1-222ENST00000555506 H2BFMP0C1H6 154 aa3.38□□□□□ -1.87
KTN1-222ENST00000555506 PTBP1P26599 531 aaKnown RBP eCLIP3.38□□□□□ -1.87
KTN1-222ENST00000555506 SHC1P29353 583 aa3.38□□□□□ -1.87
KTN1-222ENST00000555506 IST1P53990 364 aa3.38□□□□□ -1.87
KTN1-222ENST00000555506 ERVPABLB-1P60509 514 aa3.38□□□□□ -1.87
KTN1-222ENST00000555506 VLDLRP98155 873 aa3.38□□□□□ -1.87
KTN1-222ENST00000555506 OTUD4Q01804 1114 aaKnown RBP3.38□□□□□ -1.87
KTN1-222ENST00000555506 MAP2K1Q02750 393 aaPredicted RBP3.38□□□□□ -1.87
KTN1-222ENST00000555506 PAX2Q02962 417 aa3.38□□□□□ -1.87
KTN1-222ENST00000555506 ST3GAL3Q11203 375 aa3.38□□□□□ -1.87
KTN1-222ENST00000555506 RUNX3Q13761 415 aa3.38□□□□□ -1.87
KTN1-222ENST00000555506 MXD4Q14582 209 aaPredicted RBP3.38□□□□□ -1.87
KTN1-222ENST00000555506 KCNJ11Q14654 390 aa3.38□□□□□ -1.87
KTN1-222ENST00000555506 KCNIP4Q6PIL6 250 aa3.38□□□□□ -1.87
KTN1-222ENST00000555506 SYT10Q6XYQ8 523 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms