RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 DNAJB12Q9NXW2 375 aaKnown RBP10.67□□□□□ -0.7
VRK1-204ENST00000555351 PCDHGB4Q9UN71 923 aa10.67□□□□□ -0.7
VRK1-204ENST00000555351 PRSS51A0A1B0GVH4 220 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 WDR91A4D1P6 747 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 NPIPB9F8W1W9 429 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 H3BML4 177 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 ADAMDEC1O15204 470 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 AGR2O95994 175 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 CD8BP10966 210 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 CD1EP15812 388 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 LBPP18428 481 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 PSMA4P25789 261 aaKnown RBP10.66□□□□□ -0.7
VRK1-204ENST00000555351 ELK4P28324 431 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 ZNF41P51814 821 aaPredicted RBP10.66□□□□□ -0.7
VRK1-204ENST00000555351 ATP12AP54707 1039 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 CLDN20P56880 219 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 RAC1P63000 192 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 LRRC74AQ0VAA2 488 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 GUSBP1Q15486 140 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 PLPPR5Q32ZL2 321 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 KLHL26Q53HC5 615 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 DCST2Q5T1A1 773 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 HHATQ5VTY9 493 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 ZAR1Q86SH2 424 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 GGNQ86UU5 652 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 UBQLNLQ8IYU4 475 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 CHDHQ8NE62 594 aaPredicted RBP10.66□□□□□ -0.7
VRK1-204ENST00000555351 TOR1AIP2Q8NFQ8 470 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 B4GALNT2Q8NHY0 566 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 CDS1Q92903 461 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 STARD4Q96DR4 205 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 YIPF4Q9BSR8 244 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 POLDIP3Q9BY77 421 aaKnown RBP10.66□□□□□ -0.7
VRK1-204ENST00000555351 DPY30Q9C005 99 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 NMUR2Q9GZQ4 415 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 CENPHQ9H3R5 247 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 GLRX2Q9NS18 164 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 FBXO34Q9NWN3 711 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 GALNT8Q9NY28 637 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 ELOVL5Q9NYP7 299 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 NDRG3Q9UGV2 375 aa10.66□□□□□ -0.7
VRK1-204ENST00000555351 POLQO75417 2590 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 SLCO1B7G3V0H7 640 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 ANKRD28O15084 1053 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 CFLARO15519 480 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 SCN2BO60939 215 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 LINGO3P0C6S8 592 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 IL11P20809 199 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 EFNA1P20827 205 aaPredicted RBP10.65□□□□□ -0.7
VRK1-204ENST00000555351 BGNP21810 368 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 ME2P23368 584 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 CPA2P48052 419 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 P2RX1P51575 399 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 AGFG1P52594 562 aaKnown RBP10.65□□□□□ -0.7
VRK1-204ENST00000555351 SUCLG1P53597 346 aaKnown RBP10.65□□□□□ -0.7
VRK1-204ENST00000555351 TXNL4AP83876 142 aaKnown RBP10.65□□□□□ -0.7
VRK1-204ENST00000555351 BST1Q10588 318 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 PGS1Q32NB8 556 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 PDSS1Q5T2R2 415 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 ESPNLQ6ZVH7 1005 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 SPATA19Q7Z5L4 167 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 GCNT2Q8N0V5 402 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 FBXO30Q8TB52 745 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 SMPDL3BQ92485 455 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 CHMP6Q96FZ7 201 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 ADGRG7Q96K78 797 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 OR7D2Q96RA2 312 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 SDF2Q99470 211 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 PINK1Q9BXM7 581 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 CLEC4MQ9H2X3 399 aaPredicted RBP10.65□□□□□ -0.7
VRK1-204ENST00000555351 ZNF395Q9H8N7 513 aaPredicted RBP10.65□□□□□ -0.7
VRK1-204ENST00000555351 POLE3Q9NRF9 147 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 MED17Q9NVC6 651 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 THAP1Q9NVV9 213 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 VDAC3Q9Y277 283 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 DTNAQ9Y4J8 743 aa10.65□□□□□ -0.7
VRK1-204ENST00000555351 GPC6Q9Y625 555 aaPredicted RBP10.65□□□□□ -0.7
VRK1-204ENST00000555351 MED12LQ86YW9 2145 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 TMEM120BA0PK00 339 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 TRPC5OSA6NMA1 111 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 ETV2O00321 342 aaPredicted RBP10.64□□□□□ -0.71
VRK1-204ENST00000555351 HDAC3O15379 428 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 SEC14L5O43304 696 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 EIF4E2O60573 245 aaKnown RBP10.64□□□□□ -0.71
VRK1-204ENST00000555351 DNAJA2O60884 412 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 SNNO75324 88 aaPredicted RBP10.64□□□□□ -0.71
VRK1-204ENST00000555351 STX11O75558 287 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 UQCRC2P22695 453 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 TCEA1P23193 301 aaKnown RBP10.64□□□□□ -0.71
VRK1-204ENST00000555351 DNAJA1P31689 397 aaKnown RBP10.64□□□□□ -0.71
VRK1-204ENST00000555351 MAGEA8P43361 318 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 KIR2DL2P43627 348 aaPredicted RBP10.64□□□□□ -0.71
VRK1-204ENST00000555351 ZNF117Q03924 483 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 PON3Q15166 354 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 CD226Q15762 336 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 ZNF141Q15928 474 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 SGCBQ16585 318 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 ARHGAP11BQ3KRB8 267 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 SLC25A53Q5H9E4 307 aa10.64□□□□□ -0.71
VRK1-204ENST00000555351 CCNJQ5T5M9 372 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms