RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 BAG2O95816 211 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 PRB1P04280 392 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 GPIP06744 558 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 CYP4B1P13584 511 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 CNR1P21554 472 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 EVI2BP34910 448 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 GPR85P60893 370 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 C19orf57Q0VDD7 668 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 GNA13Q14344 377 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 MTX3Q5HYI7 312 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 SLC30A6Q6NXT4 461 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 TMEM81Q6P7N7 255 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 FIGNL1Q6PIW4 674 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 EIF3MQ7L2H7 374 aaKnown RBP9.99□□□□□ -0.81
SHMT2-218ENST00000555213 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-218ENST00000555213 SULF2Q8IWU5 870 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 PQLC1Q8N2U9 271 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 ZNF843Q8N446 348 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 OR2M7Q8NG81 312 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 XAGE5Q8WWM1 108 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 LRTOMTQ8WZ04 291 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 STMN2Q93045 179 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 HGDQ93099 445 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 ZG16BQ96DA0 208 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 TMEM19Q96HH6 336 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 PYURFQ96I23 114 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 JSRP1Q96MG2 331 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-218ENST00000555213 CHID1Q9BWS9 393 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 TBL1XR1Q9BZK7 514 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 HOXD1Q9GZZ0 328 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 NTN4Q9HB63 628 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 CACYBPQ9HB71 228 aaKnown RBP9.99□□□□□ -0.81
SHMT2-218ENST00000555213 BCL2L10Q9HD36 194 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 POLE3Q9NRF9 147 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 SDHAF3Q9NRP4 125 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 P2RX2Q9UBL9 471 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 CNOT11Q9UKZ1 510 aaKnown RBP9.99□□□□□ -0.81
SHMT2-218ENST00000555213 LIPT1Q9Y234 373 aa9.99□□□□□ -0.81
SHMT2-218ENST00000555213 SMG1Q96Q15 3661 aaKnown RBP9.98□□□□□ -0.81
SHMT2-218ENST00000555213 H3BNH8 94 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 SCDO00767 359 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 TFECO14948 347 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-218ENST00000555213 SUV39H1O43463 412 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 SLC28A2O43868 658 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 STX11O75558 287 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 TIPRLO75663 272 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 MFN2O95140 757 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 UTS2O95399 124 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 NGFRP08138 427 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 CHRM4P08173 479 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 CD247P20963 164 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 ELAVL4P26378 380 aaKnown RBP9.98□□□□□ -0.81
SHMT2-218ENST00000555213 AQP1P29972 269 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 CASP3P42574 277 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 PTDSS1P48651 473 aaKnown RBP9.98□□□□□ -0.81
SHMT2-218ENST00000555213 DNASE1L1P49184 302 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 SELENOWP63302 87 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 KCNJ10P78508 379 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 ALDH6A1Q02252 535 aaKnown RBP9.98□□□□□ -0.81
SHMT2-218ENST00000555213 INPP5JQ15735 1006 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-218ENST00000555213 ARHGAP11BQ3KRB8 267 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 FLYWCH1Q4VC44 716 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 GPAT3Q53EU6 434 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 CYBRD1Q53TN4 286 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 RPS26P11Q5JNZ5 115 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-218ENST00000555213 COLEC12Q5KU26 742 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 CCNJQ5T5M9 372 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 REEP3Q6NUK4 255 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 VTCN1Q7Z7D3 282 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 SLC22A16Q86VW1 577 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 EID3Q8N140 333 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 CISD2Q8N5K1 135 aaKnown RBP9.98□□□□□ -0.81
SHMT2-218ENST00000555213 METTL25Q8N6Q8 603 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 ZFP62Q8NB50 900 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-218ENST00000555213 CHDHQ8NE62 594 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-218ENST00000555213 CPT1CQ8TCG5 803 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 FAM162AQ96A26 154 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 TMEM41AQ96HV5 264 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 RSRC1Q96IZ7 334 aaKnown RBP9.98□□□□□ -0.81
SHMT2-218ENST00000555213 C7orf34Q96L11 122 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 FRMD6Q96NE9 622 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 NODALQ96S42 347 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 SEPHS2Q99611 448 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 WFDC6Q9BQY6 131 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 ANGPTL4Q9BY76 406 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 TRIM15Q9C019 465 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 UBQLN4Q9NRR5 601 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 FBXO34Q9NWN3 711 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 CALML5Q9NZT1 146 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 WIF1Q9Y5W5 379 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 COL6A6A6NMZ7 2263 aa9.98□□□□□ -0.81
SHMT2-218ENST00000555213 A0A0G2JMM0 328 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 A0A1W2PPB8 328 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 A0A1W2PRS3 328 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 KIR3DP1A8MWS1 328 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 C5orf58C9J3I9 102 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 HNRNPRO43390 633 aaKnown RBP9.97□□□□□ -0.81
SHMT2-218ENST00000555213 SCO2O43819 266 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 TPST1O60507 370 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 FCMRO60667 390 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms