RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 SLC34A3Q8N130 599 aa13.81□□□□□ -0.2
XRCC3-211ENST00000555055 FYTTD1Q96QD9 318 aaKnown RBP13.81□□□□□ -0.2
XRCC3-211ENST00000555055 MED18Q9BUE0 208 aa13.81□□□□□ -0.2
XRCC3-211ENST00000555055 GTPBP2Q9BX10 602 aaKnown RBP13.81□□□□□ -0.2
XRCC3-211ENST00000555055 ACTRT3Q9BYD9 372 aa13.81□□□□□ -0.2
XRCC3-211ENST00000555055 SPTY2D1-AS1A0A0U1RR47 76 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 LOC105371267A0A1B0GV96 52 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 HRKO00198 91 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 HOXC4P09017 264 aaPredicted RBP13.8□□□□□ -0.2
XRCC3-211ENST00000555055 CSF3P09919 207 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 ACP2P11117 423 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 GSTM5P46439 218 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 OR3A3P47888 321 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 QPRTQ15274 297 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 ABI3BPQ7Z7G0 1075 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 ZAR1Q86SH2 424 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 CSNK1A1LQ8N752 337 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 OR8D4Q8NGM9 314 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 OR9Q1Q8NGQ5 310 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 GPBAR1Q8TDU6 330 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 TMEM255BQ8WV15 326 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 C11orf54Q9H0W9 315 aaPredicted RBP13.8□□□□□ -0.2
XRCC3-211ENST00000555055 C8orf33Q9H7E9 229 aaPredicted RBP13.8□□□□□ -0.2
XRCC3-211ENST00000555055 WDR70Q9NW82 654 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 LYARQ9NX58 379 aaKnown RBP13.8□□□□□ -0.2
XRCC3-211ENST00000555055 USP36Q9P275 1121 aaKnown RBP13.8□□□□□ -0.2
XRCC3-211ENST00000555055 SLC13A4Q9UKG4 626 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 MGAT4BQ9UQ53 548 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 LRP4O75096 1905 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 COL4A2P08572 1712 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 A0A0G2JMP0 313 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 A0A0G2JPF8 293 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 A0A1W2PRQ8 180 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 HNRNPCL2B2RXH8 293 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 HNRNPCL3B7ZW38 293 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 PRAMEF26H0Y7S4 382 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 TNFRSF10CO14798 259 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 SHOXO15266 292 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 TMCC2O75069 709 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 HNRNPCL4P0DMR1 293 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 SMIM10L1P0DMW3 83 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 CPMP14384 443 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 PTBP1P26599 531 aaKnown RBP eCLIP13.8□□□□□ -0.2
XRCC3-211ENST00000555055 HTR2BP41595 481 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 RGS8P57771 180 aaPredicted RBP13.8□□□□□ -0.2
XRCC3-211ENST00000555055 SPHARQ15513 63 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 WDR45BQ5MNZ6 344 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 ENTPD8Q5MY95 495 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 B3GLCTQ6Y288 498 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 CADM2Q8N3J6 435 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 ZNF614Q8N883 585 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 SPERTQ8NA61 448 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 PROKR2Q8NFJ6 384 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 BAHD1Q8TBE0 780 aaPredicted RBP13.8□□□□□ -0.2
XRCC3-211ENST00000555055 NT5CQ8TCD5 201 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 SFXN5Q8TD22 340 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 ASB12Q8WXK4 309 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 SMIM10Q96HG1 83 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 PRRC1Q96M27 445 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 NECTIN4Q96NY8 510 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 SERINC2Q96SA4 455 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 CCDC3Q9BQI4 270 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 MMP28Q9H239 520 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 BCL2L10Q9HD36 194 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 ZSCAN32Q9NX65 697 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 HCN3Q9P1Z3 774 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 SSR3Q9UNL2 185 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 SLC22A7Q9Y694 548 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 FREM2Q5SZK8 3169 aa13.8□□□□□ -0.2
XRCC3-211ENST00000555055 A0A0B4J293 547 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 FAM170BA6NMN3 283 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 C2orf74A8MZ97 194 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 AP2S1P53680 142 aaPredicted RBP13.79□□□□□ -0.2
XRCC3-211ENST00000555055 UBE2IP63279 158 aaKnown RBP13.79□□□□□ -0.2
XRCC3-211ENST00000555055 ILKQ13418 452 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 FAM214AQ32MH5 1076 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 KIAA0895LQ68EN5 471 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 SLC30A6Q6NXT4 461 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 FAM131AQ6UXB0 335 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 ZNF730Q6ZMV8 503 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 TMEM80Q96HE8 168 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 LRR1Q96L50 414 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 LRRC61Q9BV99 259 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 EXOSC4Q9NPD3 245 aaKnown RBP13.79□□□□□ -0.2
XRCC3-211ENST00000555055 WDR45Q9Y484 360 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 A0A0A6YYC8 382 aaPredicted RBP13.79□□□□□ -0.2
XRCC3-211ENST00000555055 GXYLT2A0PJZ3 443 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 I3L1I5 382 aaPredicted RBP13.79□□□□□ -0.2
XRCC3-211ENST00000555055 TFECO14948 347 aaPredicted RBP13.79□□□□□ -0.2
XRCC3-211ENST00000555055 CSO75390 466 aaKnown RBP13.79□□□□□ -0.2
XRCC3-211ENST00000555055 CYP7B1O75881 506 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 RABIFP47224 123 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 YPEL5P62699 121 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 ZNF91Q05481 1191 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 IKZF1Q13422 519 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 CEBPEQ15744 281 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 PUS10Q3MIT2 529 aaKnown RBP13.79□□□□□ -0.2
XRCC3-211ENST00000555055 PDZK1Q5T2W1 519 aa13.79□□□□□ -0.2
XRCC3-211ENST00000555055 TYW3Q6IPR3 259 aaKnown RBP13.79□□□□□ -0.2
XRCC3-211ENST00000555055 CDC73Q6P1J9 531 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms