RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 TMEM181Q9P2C4 612 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 ABCD2Q9UBJ2 740 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 SLC7A8Q9UHI5 535 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 ATP6V1HQ9UI12 483 aa9.6□□□□□ -0.87
SHMT2-215ENST00000554656 C1orf226A1L170 272 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 PRAMEF25A6NGN4 478 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 PCDH7O60245 1069 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 ERN1O75460 977 aaKnown RBP9.59□□□□□ -0.87
SHMT2-215ENST00000554656 ATE1O95260 518 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 IL18BPO95998 194 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 PGRP06401 933 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 TMIGD3P0DMS9 266 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-215ENST00000554656 EPXP11678 715 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 CPN1P15169 458 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 NAGAP17050 411 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 CSNK2A2P19784 350 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-215ENST00000554656 ME2P23368 584 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 DNASE1P24855 282 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 S100A3P33764 101 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 PEX19P40855 299 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 GFRA1P56159 465 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 ADAM8P78325 824 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 PLCXD2Q0VAA5 305 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 NFYCQ13952 458 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 FAM174BQ3ZCQ3 159 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 TIGD2Q4W5G0 525 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 SLC30A6Q6NXT4 461 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 NPSR1Q6W5P4 371 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 NUP54Q7Z3B4 507 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 DHDDSQ86SQ9 333 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 KRTAP1-3Q8IUG1 177 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 CHDHQ8NE62 594 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-215ENST00000554656 ZPLD1Q8TCW7 415 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 RNF138Q8WVD3 245 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 TSSK3Q96PN8 268 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 CDRT15Q96T59 188 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 MUC13Q9H3R2 512 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 PLEKHF2Q9H8W4 249 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 FAM120CQ9NX05 1096 aaKnown RBP9.59□□□□□ -0.87
SHMT2-215ENST00000554656 CLCF1Q9UBD9 225 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 FOXD3Q9UJU5 478 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-215ENST00000554656 FBXL2Q9UKC9 423 aa9.59□□□□□ -0.87
SHMT2-215ENST00000554656 EXO1Q9UQ84 846 aaKnown RBP9.59□□□□□ -0.87
SHMT2-215ENST00000554656 RPH3AQ9Y2J0 694 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-215ENST00000554656 A0A096LPI6 279 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 GNG14A0A1W2PPG7 69 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 FRG2CA6NGY1 282 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 TUBAL3A6NHL2 446 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 SCAMP2O15127 329 aaKnown RBP9.58□□□□□ -0.88
SHMT2-215ENST00000554656 TO15178 435 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 ACOX3O15254 700 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 TSPAN2O60636 221 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 KCNH1O95259 989 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 ACTL6AO96019 429 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 CT45A8P0DMV1 189 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 CT45A9P0DMV2 189 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 CYP4B1P13584 511 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 HSD17B1P14061 328 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 DRD5P21918 477 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 SLC6A2P23975 617 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 PPICP45877 212 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 ALDH9A1P49189 494 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 STARP49675 285 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 LHX2P50458 406 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 GAS1P54826 345 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 EEFSECP57772 596 aaKnown RBP9.58□□□□□ -0.88
SHMT2-215ENST00000554656 ACTR3P61158 418 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 RPP38P78345 283 aaKnown RBP9.58□□□□□ -0.88
SHMT2-215ENST00000554656 SORDQ00796 357 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 TRAP1Q12931 704 aaKnown RBP9.58□□□□□ -0.88
SHMT2-215ENST00000554656 BNIP2Q12982 314 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 SNTA1Q13424 505 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 PDE7AQ13946 482 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 CT45A2Q5DJT8 189 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 ZNF628Q5EBL2 1059 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 PAGE3Q5JUK9 113 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 SPANXN4Q5MJ08 99 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 LRIF1Q5T3J3 769 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 ANXA8L1Q5VT79 327 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 GCNT2Q8N0V5 402 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 KRTCAP2Q8N6L1 136 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 VPS37AQ8NEZ2 397 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 OR8J3Q8NGG0 315 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 GOT1L1Q8NHS2 421 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-215ENST00000554656 ZNF675Q8TD23 568 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 C16orf78Q8WTQ4 265 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 GTF2H4Q92759 462 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 KAT2AQ92830 837 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 TMBIM1Q969X1 311 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 VPS33AQ96AX1 596 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 COQ8BQ96D53 544 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 ITCHQ96J02 903 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 BTBD9Q96Q07 612 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 OR52E6Q96RD3 313 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 CGREF1Q99674 301 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 SH3GL1Q99961 368 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 BHLHE41Q9C0J9 482 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-215ENST00000554656 DENND2DQ9H6A0 471 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-215ENST00000554656 REEP4Q9H6H4 257 aa9.58□□□□□ -0.88
SHMT2-215ENST00000554656 ATAD3AQ9NVI7 634 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms