RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 TMBIM1Q969X1 311 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 TM4SF18Q96CE8 201 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 RDH12Q96NR8 316 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 TTTY12Q9BZ98 90 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 MIEF1Q9NQG6 463 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 RYDENQ9NUL5 291 aaKnown RBP11.41□□□□□ -0.58
SHMT2-214ENST00000554604 SMPD3Q9NY59 655 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-214ENST00000554604 MEMO1Q9Y316 297 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 ZNF780BQ9Y6R6 833 aa11.41□□□□□ -0.58
SHMT2-214ENST00000554604 LRBAP50851 2863 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 A0A1W2PRB8 838 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 E9PLN8 166 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 EI24O14681 340 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 NADKO95544 446 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-214ENST00000554604 C6orf47O95873 294 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 CST1P01037 141 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 MT-ND1P03886 318 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 SEMG1P04279 462 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 CSNK2A2P19784 350 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-214ENST00000554604 MYF6P23409 242 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 PIGAP37287 484 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 FEN1P39748 380 aaKnown RBP11.4□□□□□ -0.58
SHMT2-214ENST00000554604 NR0B1P51843 470 aaKnown RBP11.4□□□□□ -0.58
SHMT2-214ENST00000554604 NRG3P56975 720 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 HBA1P69905 142 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 RBBP4Q09028 425 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 MERTKQ12866 999 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 DAG1Q14118 895 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 HEPACAMQ14CZ8 416 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 ADRM1Q16186 407 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 ZNF791Q3KP31 576 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-214ENST00000554604 SLC36A3Q495N2 470 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 SP5Q6BEB4 398 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-214ENST00000554604 CBLL1Q75N03 491 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 EIF3MQ7L2H7 374 aaKnown RBP11.4□□□□□ -0.58
SHMT2-214ENST00000554604 CD163Q86VB7 1156 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 MMP21Q8N119 569 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 VWA5B2Q8N398 1253 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 OR5M3Q8NGP4 307 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 FAM57AQ8TBR7 257 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 VKORC1Q9BQB6 163 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 SLC35A5Q9BS91 424 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 ADI1Q9BV57 179 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 FAM192AQ9GZU8 254 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 OR10A5Q9H207 317 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 PNPLA3Q9NST1 481 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 TUBA8Q9NY65 449 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-214ENST00000554604 TAS2R9Q9NYW1 312 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 USE1Q9NZ43 259 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 CNIH4Q9P003 139 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 BOKQ9UMX3 212 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-214ENST00000554604 ENTPD4Q9Y227 616 aa11.4□□□□□ -0.58
SHMT2-214ENST00000554604 KLF2Q9Y5W3 355 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-214ENST00000554604 H0YAE9 185 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 TP53I11O14683 189 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 GLSO94925 669 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-214ENST00000554604 KRT75O95678 551 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 C1QCP02747 245 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 FBXO45P0C2W1 286 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 CT62P0C5K7 136 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 LINGO3P0C6S8 592 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 SMIM18P0DKX4 95 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 DRD2P14416 443 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 EFNA1P20827 205 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-214ENST00000554604 AGAP20933 346 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 UQCRC2P22695 453 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 CAPGP40121 348 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 FRKP42685 505 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-214ENST00000554604 MAGEA5P43359 124 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 TMED10P49755 219 aaKnown RBP11.39□□□□□ -0.59
SHMT2-214ENST00000554604 ALDH3A2P51648 485 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 MVDP53602 400 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 ADORA2A-AS1P86434 159 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 FUT7Q11130 342 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 PRSS53Q2L4Q9 553 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 PRAMEF20Q5VT98 475 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 FGD2Q7Z6J4 655 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 ZDHHC13Q8IUH4 622 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 FAM109AQ8N4B1 249 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 DHRSXQ8N5I4 330 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 TMEM251Q8N6I4 163 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 C11orf65Q8NCR3 313 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 OR7G1Q8NGA0 311 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 OR10G3Q8NGC4 313 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 OR5K1Q8NHB7 308 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 PAQR8Q8TEZ7 354 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 OR5P2Q8WZ92 322 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 TP53INP1Q96A56 240 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 CIDECQ96AQ7 238 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-214ENST00000554604 SDCCAG3Q96C92 435 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 JSRP1Q96MG2 331 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-214ENST00000554604 MRPS26Q9BYN8 205 aaKnown RBP11.39□□□□□ -0.59
SHMT2-214ENST00000554604 TMEM38AQ9H6F2 299 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 LDAHQ9H6V9 325 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 RUBCNLQ9H714 662 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 EXO5Q9H790 373 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 ZDHHC11Q9H8X9 412 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 CHST11Q9NPF2 352 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 PLSCR2Q9NRY7 297 aa11.39□□□□□ -0.59
SHMT2-214ENST00000554604 UTS2RQ9UKP6 389 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms