RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 AKTIPQ9H8T0 292 aa9.4□□□□□ -0.9
PTCD2P1-201ENST00000554393 KCNK9Q9NPC2 374 aa9.4□□□□□ -0.9
PTCD2P1-201ENST00000554393 GPATCH2Q9NW75 528 aa9.4□□□□□ -0.9
PTCD2P1-201ENST00000554393 STOML1Q9UBI4 398 aa9.4□□□□□ -0.9
PTCD2P1-201ENST00000554393 FAF1Q9UNN5 650 aaPredicted RBP9.4□□□□□ -0.9
PTCD2P1-201ENST00000554393 SNX8Q9Y5X2 465 aa9.4□□□□□ -0.9
PTCD2P1-201ENST00000554393 AP4B1Q9Y6B7 739 aa9.4□□□□□ -0.9
PTCD2P1-201ENST00000554393 ABCA4P78363 2273 aa9.4□□□□□ -0.9
PTCD2P1-201ENST00000554393 AKAP6Q13023 2319 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 NIPBLQ6KC79 2804 aaeCLIP9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 RNASET2O00584 256 aaKnown RBP9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 TNFRSF21O75509 655 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 GOSR1O95249 250 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 C6orf47O95873 294 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 HPGDP15428 266 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 EFNA1P20827 205 aaPredicted RBP9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 BGNP21810 368 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 PCYT1AP49585 367 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 HBA1P69905 142 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 BST1Q10588 318 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 TP53BP2Q13625 1128 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 DPY19L1Q2PZI1 675 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 SPDYE7PQ495Y7 208 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 HHATQ5VTY9 493 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 OGFOD2Q6N063 350 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 MTERF4Q7Z6M4 381 aaKnown RBP9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 ZAR1Q86SH2 424 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 CDH24Q86UP0 819 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 GTPBP8Q8N3Z3 284 aaPredicted RBP9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 ZNF527Q8NB42 609 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 RAB3IL1Q8TBN0 382 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 ADAMTS15Q8TE58 950 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 HPS1Q92902 700 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 CDS1Q92903 461 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 ZBTB8AQ96BR9 441 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 TESCQ96BS2 214 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 YIPF4Q9BSR8 244 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 HOXD1Q9GZZ0 328 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 MEAF6Q9HAF1 191 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 ZNF337Q9Y3M9 751 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 ZNF175Q9Y473 711 aa9.39□□□□□ -0.91
PTCD2P1-201ENST00000554393 HEATR5AQ86XA9 2040 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 TMEM120BA0PK00 339 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 FAM221AA4D161 298 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 SLC22A20A6NK97 555 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 DUXAA6NLW8 204 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 EEF1E1-BLOC1S5C9J1V9 151 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 CFLARO15519 480 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 EEF1E1O43324 174 aaKnown RBP9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 CTAG2O75638 210 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 TNFSF13O75888 250 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 TGM6O95932 706 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 AK1P00568 194 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 FCGR2AP12318 317 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 LBPP18428 481 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 ATP6V1C1P21283 382 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 TCEA1P23193 301 aaKnown RBP9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 CLNS1AP54105 237 aaKnown RBP9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 SUMO3P55854 103 aaPredicted RBP9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 CLDN15P56746 228 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 RPS3AP61247 264 aaKnown RBP9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 FOXF2Q12947 444 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 FGFBP1Q14512 234 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 DCST2Q5T1A1 773 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 ANXA8L1Q5VT79 327 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 P4HA3Q7Z4N8 544 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 TMEM200AQ86VY9 491 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 UBQLNLQ8IYU4 475 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 METTL25Q8N6Q8 603 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 VPS37AQ8NEZ2 397 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 INTS12Q96CB8 462 aaKnown RBP9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 CHMP6Q96FZ7 201 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 NUF2Q9BZD4 464 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 DPY30Q9C005 99 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 ALG2Q9H553 416 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 RNF122Q9H9V4 155 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 THAP1Q9NVV9 213 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 FBXO34Q9NWN3 711 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 PAQR5Q9NXK6 330 aaPredicted RBP9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 CRIM1Q9NZV1 1036 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 PACSIN3Q9UKS6 424 aa9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 HRNRQ86YZ3 2850 aaPredicted RBP9.38□□□□□ -0.91
PTCD2P1-201ENST00000554393 MTORP42345 2549 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 PRSS51A0A1B0GVH4 220 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 A0A1W2PNV4 684 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 TUBAL3A6NHL2 446 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 POM121CA8CG34 1229 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 A8MXE2 369 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 NPIPB9F8W1W9 429 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 SLCO1B7G3V0H7 640 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 H3BML4 177 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 H3BNH8 94 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 MSTNO14793 375 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 ANKRD28O15084 1053 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 SCN2BO60939 215 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 SNNO75324 88 aaPredicted RBP9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 AGR2O95994 175 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 GUSBP08236 651 aa9.37□□□□□ -0.91
PTCD2P1-201ENST00000554393 PSMA4P25789 261 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms