RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 TWSG1Q9GZX9 223 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 RACGAP1Q9H0H5 632 aa13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 SPIN1Q9Y657 262 aaPredicted RBP13.66□□□□□ -0.22
PPP4R3A-201ENST00000554308 FAM221BA6H8Z2 402 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 POLR1CO15160 346 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 TRAPPC2P0DI81 140 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 TRAPPC2BP0DI82 140 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 NME1P15531 152 aaKnown RBP13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 CD79BP40259 229 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 NCF4Q15080 339 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 CEP78Q5JTW2 689 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 MFSD4BQ5TF39 518 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 C12orf73Q69YU5 71 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 GDPGP1Q6ZNW5 385 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 C11orf74Q86VG3 221 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 COMTD1Q86VU5 262 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 LRRC25Q8N386 305 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 OR7G2Q8NG99 324 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 ZG16BQ96DA0 208 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 SLC38A3Q99624 504 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 POLR2J3Q9H1A7 115 aaKnown RBP13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 ZSCAN32Q9NX65 697 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 PHF11Q9UIL8 331 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 EMC8O43402 210 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 ADAP00813 363 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 TP53P04637 393 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 CHRM4P08173 479 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 ZNF10P21506 573 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 BCKDHBP21953 392 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 KHKP50053 298 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 SHC2P98077 582 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 MLLT11Q13015 90 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 SRSF5Q13243 272 aaKnown RBP13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 ILKQ13418 452 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 QPRTQ15274 297 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 P2RY14Q15391 338 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 TATDN3Q17R31 274 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 TMEM201Q5SNT2 666 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 PGBD2Q6P3X8 592 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 FAM111BQ6SJ93 734 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 PRR23CQ6ZRP0 262 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 SHFQ7M4L6 423 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 ZNF655Q8N720 491 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 TMEM52Q8NDY8 209 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 PROKR2Q8NFJ6 384 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 ENKURQ8TC29 256 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 TM9SF4Q92544 642 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 MAP3K3Q99759 626 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 CTPS2Q9NRF8 586 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 UCKL1Q9NWZ5 548 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 COMMD3Q9UBI1 195 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 POMT2Q9UKY4 750 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 TMCC3Q9ULS5 477 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 RPL36Q9Y3U8 105 aaKnown RBP13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 ALG5Q9Y673 324 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 SLC22A7Q9Y694 548 aa13.65□□□□□ -0.22
PPP4R3A-201ENST00000554308 PDE9AO76083 593 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 PSKH1P11801 424 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 MLLT3P42568 568 aaPredicted RBP13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 P2RX3P56373 397 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 FUT5Q11128 374 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 TARDBPQ13148 414 aaKnown RBP eCLIP13.64□□□□□ -0.233e-6■■■□□ 15.1
PPP4R3A-201ENST00000554308 MEDAGQ5VYS4 303 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 TMEM64Q6YI46 380 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 GKN2Q86XP6 184 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 SPEM1Q8N4L4 309 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 SLC16A11Q8NCK7 471 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 CADM4Q8NFZ8 388 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 OR56A1Q8NGH5 318 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 OR9A4Q8NGU2 314 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 OR52P1PQ8NH57 321 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 GATAD2BQ8WXI9 593 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 SLC9A6Q92581 669 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 SNAPC3Q92966 411 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 OR7D2Q96RA2 312 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 DCLRE1CQ96SD1 692 aaKnown RBP13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 KATNB1Q9BVA0 655 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 RBCK1Q9BYM8 510 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 SEMA6CQ9H3T2 930 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 B3GAT2Q9NPZ5 323 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 ENOPH1Q9UHY7 261 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 CACNA1IQ9P0X4 2223 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 M0R3H8 397 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 ZNF780AO75290 641 aaPredicted RBP13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 NCR1O76036 304 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 KCNJ5P48544 419 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 FAPQ12884 760 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 PIN1Q13526 163 aaPredicted RBP13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 TRMT12Q53H54 448 aaKnown RBP13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 DCST1Q5T197 706 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 RNF44Q7L0R7 432 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 OR4M1Q8NGD0 313 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 SLC7A13Q8TCU3 470 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 C1GALT1C1Q96EU7 318 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 ZNF354BQ96LW1 612 aa13.64□□□□□ -0.23
PPP4R3A-201ENST00000554308 ARRDC5A6NEK1 342 aa13.63□□□□□ -0.23
PPP4R3A-201ENST00000554308 FAM25AB3EWG3 89 aa13.63□□□□□ -0.23
PPP4R3A-201ENST00000554308 FAM25CB3EWG5 89 aa13.63□□□□□ -0.23
PPP4R3A-201ENST00000554308 FAM25GB3EWG6 89 aa13.63□□□□□ -0.23
PPP4R3A-201ENST00000554308 IL1AP01583 271 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms