RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 IDH2P48735 452 aaKnown RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 SLC9A3P48764 834 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 CSNK1EP49674 416 aaKnown RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 WNT3P56703 355 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 NRG3P56975 720 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 SNRPD1P62314 119 aaKnown RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 PSPHP78330 225 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 PLIN5Q00G26 463 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 SEMG2Q02383 582 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 CHIT1Q13231 466 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 ILKQ13418 452 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 TNK1Q13470 666 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 CDH18Q13634 790 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 ENPP2Q13822 863 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 PDE7AQ13946 482 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 SCARB2Q14108 478 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 QPRTQ15274 297 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 SPHARQ15513 63 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 MED22Q15528 200 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 SMN1Q16637 294 aaKnown RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 FAM214AQ32MH5 1076 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 PTCHD3Q3KNS1 767 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 GPAT3Q53EU6 434 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 FBXO48Q5FWF7 155 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 ZNF362Q5T0B9 420 aaPredicted RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 LCN1P1Q5VSP4 162 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 CXorf57Q6NSI4 855 aaKnown RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 MZT2AQ6P582 158 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 PLET1Q6UQ28 207 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 FAM151BQ6UXP7 276 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 ZNF782Q6ZMW2 699 aaPredicted RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 CREB3L2Q70SY1 520 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 VTCN1Q7Z7D3 282 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 NOXA1Q86UR1 476 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 DENND1CQ8IV53 801 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 OR8H2Q8N162 312 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 CPXM2Q8N436 756 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 D2HGDHQ8N465 521 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 SLC5A8Q8N695 610 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 PSD4Q8NDX1 1056 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 B3GNT7Q8NFL0 401 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 OR4A15Q8NGL6 344 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 WDR36Q8NI36 951 aaKnown RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 WDR20Q8TBZ3 569 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 ENKURQ8TC29 256 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 ACOT12Q8WYK0 555 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 SLC7A6Q92536 515 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 SLC25A46Q96AG3 418 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 PYCR2Q96C36 320 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 WDR34Q96EX3 536 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 C11orf24Q96F05 449 aaPredicted RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 FOPNLQ96NB1 174 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 MCCC1Q96RQ3 725 aaPredicted RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 HBEGFQ99075 208 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 CCM2Q9BSQ5 444 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 MENTQ9BUN1 341 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 CPEB1Q9BZB8 566 aaKnown RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 SRRQ9GZT4 340 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 REEP4Q9H6H4 257 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 NT5DC2Q9H857 520 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 RNF121Q9H920 327 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 SLC25A19Q9HC21 320 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 MYNNQ9NPC7 610 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 RPRD1BQ9NQG5 326 aaKnown RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 DMRT3Q9NQL9 472 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 SLC6A13Q9NSD5 602 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 FARSBQ9NSD9 589 aaKnown RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 MRPS18AQ9NVS2 196 aaKnown RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 MS4A12Q9NXJ0 267 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 FBXL12Q9NXK8 326 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 AHSPQ9NZD4 102 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 SLCO3A1Q9UIG8 710 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 UTS2RQ9UKP6 389 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 PNMA8BQ9ULN7 279 aaPredicted RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 DIMT1Q9UNQ2 313 aaKnown RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 PCDHGA9Q9Y5G4 932 aaKnown RBP5.53□□□□□ -1.52
VPS33B-203ENST00000554264 NOX1Q9Y5S8 564 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 ASXL3Q9C0F0 2248 aa5.53□□□□□ -1.52
VPS33B-203ENST00000554264 PLXNA2O75051 1894 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 TMEM129A0AVI4 362 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 IQCF5A8MTL0 148 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 C5orf58C9J3I9 102 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 TLR4O00206 839 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 YKT6O15498 198 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 RGS5O15539 181 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 ORC5O43913 435 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 SLC19A2O60779 497 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 PSIP1O75475 530 aaKnown RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 ITGA10O75578 1167 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 SLCO2B1O94956 709 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 CPSF4O95639 269 aaKnown RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 LDOC1O95751 146 aaPredicted RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 RAB36O95755 333 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 TBX18O95935 607 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 PTHP01270 115 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 C1QBP02746 253 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 STSP08842 583 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 ANXA4P09525 319 aaPredicted RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 ATP1B2P14415 290 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms