RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 FBXW11Q9UKB1 542 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 ST3GAL5Q9UNP4 418 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 FAM50BQ9Y247 325 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 RASD1Q9Y272 281 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 COL4A4P53420 1690 aaPredicted RBP8.94□□□□□ -0.98
SIX4-202ENST00000554079 EVPLQ92817 2033 aa8.94□□□□□ -0.98
SIX4-202ENST00000554079 KIF26AQ9ULI4 1882 aaPredicted RBP8.94□□□□□ -0.98
SIX4-202ENST00000554079 A0A1W2PRQ8 180 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 MATN3O15232 486 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 TOX3O15405 576 aaPredicted RBP8.93□□□□□ -0.98
SIX4-202ENST00000554079 B4GALT5O43286 388 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 PIP5K1CO60331 668 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 ITGA10O75578 1167 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 ADAP00813 363 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 RHOP08100 348 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 PRSS56P0CW18 603 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 GALP22466 123 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 TACR1P25103 407 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 GDNFP39905 211 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 WNT3P56703 355 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 DAOAP59103 153 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 PKIAP61925 76 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 KCNA10Q16322 511 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 PLEKHN1Q494U1 663 aaPredicted RBP8.93□□□□□ -0.98
SIX4-202ENST00000554079 TIGD5Q53EQ6 642 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 ZNF805Q5CZA5 627 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 SLC35D3Q5M8T2 416 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 ATXN7L2Q5T6C5 722 aaPredicted RBP8.93□□□□□ -0.98
SIX4-202ENST00000554079 MRNIPQ6NTE8 343 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 TMEM71Q6P5X7 295 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 TMPRSS11FQ6ZWK6 438 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 OR4F15Q8NGB8 312 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 OR4A4PQ8NGN8 299 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 SMAP2Q8WU79 429 aaPredicted RBP8.93□□□□□ -0.98
SIX4-202ENST00000554079 XAGE5Q8WWM1 108 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 S100PBPQ96BU1 408 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 RAB3CQ96E17 227 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 PHYHIPLQ96FC7 376 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 CNTNAP3BQ96NU0 1288 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 CLCC1Q96S66 551 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 FDXACB1Q9BRP7 624 aaPredicted RBP8.93□□□□□ -0.98
SIX4-202ENST00000554079 TRIM62Q9BVG3 475 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 TRMT61BQ9BVS5 477 aaKnown RBP8.93□□□□□ -0.98
SIX4-202ENST00000554079 JAM3Q9BX67 310 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 GPR61Q9BZJ8 451 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 TM6SF2Q9BZW4 377 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 CHST5Q9GZS9 411 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 AUNIPQ9H7T9 357 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 CRLF2Q9HC73 371 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 MYOZ2Q9NPC6 264 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 OR12D3Q9UGF7 316 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 ZMYM5Q9UJ78 669 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 FBXL21Q9UKT6 434 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 EXOSC1Q9Y3B2 195 aaKnown RBP8.93□□□□□ -0.98
SIX4-202ENST00000554079 HELZP42694 1942 aaKnown RBP8.93□□□□□ -0.98
SIX4-202ENST00000554079 MAGEB17A8MXT2 336 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 F5H5P2 479 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 CTDSPLO15194 276 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 FGF16O43320 207 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 TLR5O60602 858 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 MT-ND4LP03901 98 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 GKN3PP0CG01 181 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 HLA-DPA1P20036 260 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 IHHQ14623 411 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 INPP5JQ15735 1006 aaPredicted RBP8.93□□□□□ -0.98
SIX4-202ENST00000554079 CSRP2Q16527 193 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 DCAF12L2Q5VW00 463 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 MFSD14CQ5VZR4 134 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 OR4Q3Q8NH05 313 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 SMIM4Q8WVI0 70 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 MAL2Q969L2 176 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 ZNF75AQ96N20 296 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 ASB16Q96NS5 453 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 TSSK3Q96PN8 268 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 GINS4Q9BRT9 223 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 ZPBPQ9BS86 351 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 IPPKQ9H8X2 491 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 PLEKHA1Q9HB21 404 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 GPN1Q9HCN4 374 aaPredicted RBP8.93□□□□□ -0.98
SIX4-202ENST00000554079 LHX9Q9NQ69 397 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 C19orf12Q9NSK7 152 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 OSER1Q9NX31 292 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 ADAMTS5Q9UNA0 930 aa8.93□□□□□ -0.98
SIX4-202ENST00000554079 TRAV14DV4A0A0A6YYC5 116 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 GLTPD2A6NH11 291 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 KDM4EB2RXH2 506 aaPredicted RBP8.92□□□□□ -0.98
SIX4-202ENST00000554079 MANBAO00462 879 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 EMC8O43402 210 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 EFCAB14O75071 495 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 CD2P06729 351 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 ANXA2P07355 339 aaKnown RBP8.92□□□□□ -0.98
SIX4-202ENST00000554079 HOXB5P09067 269 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 STAG3L1P0CL83 205 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 ACP2P11117 423 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 SLC2A1P11166 492 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 PRPS2P11908 318 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 SDC1P18827 310 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 HOXA5P20719 270 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 G0S2P27469 103 aa8.92□□□□□ -0.98
SIX4-202ENST00000554079 AVPR2P30518 371 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms