RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 ERVK-6Q9BXR3 956 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 TRIM54Q9BYV2 358 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 BRINP2Q9C0B6 783 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 MS4A7Q9GZW8 240 aaPredicted RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 OPN3Q9H1Y3 402 aaPredicted RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 ANKRA2Q9H9E1 313 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 PELI2Q9HAT8 420 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 FAM114A2Q9NRY5 505 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 SACM1LQ9NTJ5 587 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 INTS10Q9NVR2 710 aaKnown RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 BFARQ9NZS9 450 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 FLRT3Q9NZU0 649 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 MGAT4CQ9UBM8 478 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 B4GALT7Q9UBV7 327 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF629Q9UEG4 869 aaPredicted RBP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 FBXL2Q9UKC9 423 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 ERVK-19Q9WJR5 959 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.82□□□□□ -1.96
SLIRP-202ENST00000553981 MMACHCQ9Y4U1 282 aa2.82□□□□□ -1.96
SLIRP-202ENST00000553981 ANK2Q01484 3957 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 A0A088AWK7 358 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 C15orf38-AP3S2A0A0A6YYH1 394 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 A0A1W2PNV4 684 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 NCF1BA6NI72 391 aaPredicted RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 GLOD5A6NK44 160 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 NCF1CA8MVU1 366 aaPredicted RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 TMEM233B4DJY2 109 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 EEF1E1-BLOC1S5C9J1V9 151 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 E7EVH7 732 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 GOLGA6L19H0YKK7 550 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 CLIC1O00299 241 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 EIF3FO00303 357 aaPredicted RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 PLPP1O14494 284 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 EEF1E1O43324 174 aaKnown RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 HCRTR2O43614 444 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ZIC3O60481 467 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 SMPD2O60906 423 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 UGT2B11O75310 529 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 SCELO95171 688 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 RCBTB2O95199 551 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 CD8AP01732 235 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 KRT14P02533 472 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 GBAP04062 536 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 P04436 131 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 IFNA16P05015 189 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 C8GP07360 202 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ABCB1P08183 1280 aaPredicted RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 SOD3P08294 240 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 FGF2P09038 288 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 CCDC175P0C221 793 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 TMIGD3P0DMS9 266 aaPredicted RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ENO3P13929 434 aaPredicted RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 NCF1P14598 390 aaPredicted RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 GABRA1P14867 456 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 PAX1P15863 534 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 CREB1P16220 341 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 PTNP21246 168 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 SAT1P21673 171 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 CRYGSP22914 178 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 TCEA1P23193 301 aaKnown RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 JAK1P23458 1154 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 HRH2P25021 359 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 GDF1P27539 372 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 EPHA3P29320 983 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 PRKAR1BP31321 381 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 CDKN1AP38936 164 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 CASP3P42574 277 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 STT3AP46977 705 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 HSPA7P48741 367 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 LHX2P50458 406 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF75DP51815 510 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 GAS1P54826 345 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 NAP1L1P55209 391 aaKnown RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 CLDN18P56856 261 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 HSD17B7P56937 341 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 SLC37A1P57057 533 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 TIRAPP58753 221 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 TAS2R39P59534 338 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 SORDQ00796 357 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 CFHR3Q02985 330 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 SRYQ05066 204 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 FUT7Q11130 342 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 GPS1Q13098 491 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 SLC13A2Q13183 592 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 DOC2AQ14183 400 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 CSHL1Q14406 222 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF267Q14586 743 aaPredicted RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 CRYMQ14894 314 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 NAA25Q14CX7 972 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 FASTKD3Q14CZ7 662 aaKnown RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 OR4D1Q15615 310 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 TSNQ15631 228 aaKnown RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 TSC22D1Q15714 1073 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 NNATQ16517 81 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF585BQ52M93 769 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 RNASEH2BQ5TBB1 312 aaKnown RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 SLC22A10Q63ZE4 541 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 MRNIPQ6NTE8 343 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 PRSS57Q6UWY2 283 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 HSDL2Q6YN16 418 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms