RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 LRIT2A6NDA9 550 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 PRR19A6NJB7 356 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 LRRC72A6NJI9 287 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 HMGN4O00479 90 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 SIGLEC5O15389 551 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 SLC31A1O15431 190 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 RGS11O94810 467 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 LALBAP00709 142 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 LAMP2P13473 410 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 CXCL3P19876 107 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 RAB3BP20337 219 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 COL9A1P20849 921 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 PEBP1P30086 187 aaKnown RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 FRKP42685 505 aaPredicted RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 RAB28P51157 221 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 KIAA1024LP59773 190 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 SIGLEC14Q08ET2 396 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 HYAL1Q12794 435 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 SGCGQ13326 291 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 COL9A2Q14055 689 aaPredicted RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 SF3A2Q15428 464 aaKnown RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 REEP3Q6NUK4 255 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 KRT74Q7RTS7 529 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 RBM45Q8IUH3 476 aaKnown RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 OR11H7Q8NGC8 314 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 OR2T35Q8NGX2 323 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 GEMIN6Q8WXD5 167 aaKnown RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 GTPBP3Q969Y2 492 aaKnown RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 NARS2Q96I59 477 aaKnown RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 NT5DC2Q9H857 520 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 DDX31Q9H8H2 851 aaKnown RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 NUDT15Q9NV35 164 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 SLC17A4Q9Y2C5 497 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 ENPP4Q9Y6X5 453 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 SNRNP200O75643 2136 aaKnown RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 A0A0A6YYD5 115 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 A0A1W2PS29 197 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 FAM74A7A6NL05 159 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 CHURC1-FNTBB4DL54 471 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 HRO43593 1189 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 TBX19O60806 448 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 EML2O95834 649 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 ALPPL2P10696 532 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 PPP2CBP62714 309 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 ERVK-25P63136 954 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 RPS21P63220 83 aaKnown RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 PPP2CAP67775 309 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 SPHARQ15513 63 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 ZNF750Q32MQ0 723 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 FAM74A3Q4VXF1 159 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 ZNF776Q68DI1 518 aaPredicted RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 OR4C11Q6IEV9 310 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 HMGN2P46Q86SG4 172 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 OR4D11Q8NGI4 311 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 OR5D16Q8NGK9 328 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 AP3S1Q92572 193 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 SLC25A46Q96AG3 418 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 CREB3L1Q96BA8 519 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 ELSPBP1Q96BH3 223 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 C1GALT1C1Q96EU7 318 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 TRMT61BQ9BVS5 477 aaKnown RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 MND1Q9BWT6 205 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 SPRTNQ9H040 489 aaPredicted RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 ESRP2Q9H6T0 727 aaKnown RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 HHATLQ9HCP6 504 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 FGF22Q9HCT0 170 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 EMC7Q9NPA0 242 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 ZNF226Q9NYT6 803 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 ZNF624Q9P2J8 865 aaPredicted RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 KIF25Q9UIL4 384 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 STUB1Q9UNE7 303 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 CLCA2Q9UQC9 943 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 ERVK-19Q9WJR5 959 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 CA5BQ9Y2D0 317 aa8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 GOLGA4Q13439 2230 aaKnown RBP8.44□□□□□ -1.06
AL049839.2-201ENST00000553947 MFSD2BA6NFX1 497 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 GPR89AB7ZAQ6 455 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 PLRG1O43660 514 aaKnown RBP8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 NARSO43776 548 aaKnown RBP8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 PRICKLE3O43900 615 aaPredicted RBP8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 GPR89BP0CG08 455 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 SSR2P43308 183 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 LIMK1P53667 647 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 ADPRHP54922 357 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TSPAN5P62079 268 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 SNRPNP63162 240 aaKnown RBP8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 DUSP2Q05923 314 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 DLX2Q07687 328 aaPredicted RBP8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 C3P1Q6ZMU1 363 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 NLRC3Q7RTR2 1065 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 COMTD1Q86VU5 262 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 BEST4Q8NFU0 473 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 OR5T2Q8NGG2 359 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 SGK3Q96BR1 496 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 ZC3HAV1LQ96H79 300 aaKnown RBP8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 TIMM29Q9BSF4 260 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 APOOQ9BUR5 198 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 CHIAQ9BZP6 476 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 GLIPR2Q9H4G4 154 aa8.43□□□□□ -1.06
AL049839.2-201ENST00000553947 A4GALTQ9NPC4 353 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms