RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 FADS6Q8N9I5 356 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 C11orf65Q8NCR3 313 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 OR2M3Q8NG83 312 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 B4GALNT2Q8NHY0 566 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 NFKBIDQ8NI38 313 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 SH3YL1Q96HL8 342 aaPredicted RBP12.61□□□□□ -0.39
TUBB3-202ENST00000553656 HOPXQ9BPY8 73 aaPredicted RBP12.61□□□□□ -0.39
TUBB3-202ENST00000553656 SPATA9Q9BWV2 254 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 RTN4RQ9BZR6 473 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 UBQLN3Q9H347 655 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 TMEM38AQ9H6F2 299 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 RUBCNLQ9H714 662 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 NANOGQ9H9S0 305 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 ACKR4Q9NPB9 350 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.61□□□□□ -0.39
TUBB3-202ENST00000553656 TAS2R10Q9NYW0 307 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 TAGLN3Q9UI15 199 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 SLC35A3Q9Y2D2 325 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 L3MBTL1Q9Y468 752 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 NINQ8N4C6 2090 aa12.61□□□□□ -0.39
TUBB3-202ENST00000553656 IGLV3-32A0A0A0MS00 114 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 A0A1B0GTH9 108 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 AGAP5A6NIR3 686 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 ZNF264O43296 627 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 SUSD5O60279 629 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 HCN1O60741 890 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 CYP7B1O75881 506 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 NUDT14O95848 222 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 CSTAP01040 98 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 IGHG3P01860 377 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 HPNP05981 417 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 IL7RP16871 459 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 GNLYP22749 145 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 CCR4P51679 360 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 ZNF41P51814 821 aaPredicted RBP12.6□□□□□ -0.39
TUBB3-202ENST00000553656 SUMO3P55854 103 aaPredicted RBP12.6□□□□□ -0.39
TUBB3-202ENST00000553656 HSF1Q00613 529 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 RBBP4Q09028 425 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 MRPL49Q13405 166 aaKnown RBP12.6□□□□□ -0.39
TUBB3-202ENST00000553656 SCARB2Q14108 478 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 SELPLGQ14242 412 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 FGFBP1Q14512 234 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 LARS2Q15031 903 aaKnown RBP12.6□□□□□ -0.39
TUBB3-202ENST00000553656 CD226Q15762 336 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.6□□□□□ -0.39
TUBB3-202ENST00000553656 LIN52Q52LA3 116 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 RABL3Q5HYI8 236 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 RPS26P11Q5JNZ5 115 aaPredicted RBP12.6□□□□□ -0.39
TUBB3-202ENST00000553656 FAM91A1Q658Y4 838 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 REEP3Q6NUK4 255 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 HACD2Q6Y1H2 254 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 TRILQ7L0X0 811 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 HMGN2P46Q86SG4 172 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 IFNEQ86WN2 208 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 SLC30A8Q8IWU4 369 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 HIPK4Q8NE63 616 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 FAM83FQ8NEG4 500 aaPredicted RBP12.6□□□□□ -0.39
TUBB3-202ENST00000553656 OR10A6Q8NH74 314 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 WDR60Q8WVS4 1066 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 QRSL1Q9H0R6 528 aaKnown RBP12.6□□□□□ -0.39
TUBB3-202ENST00000553656 SLC6A15Q9H2J7 730 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 ARMC7Q9H6L4 198 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 KAT8Q9H7Z6 458 aaKnown RBP12.6□□□□□ -0.39
TUBB3-202ENST00000553656 BCL2L10Q9HD36 194 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 ZNF232Q9UNY5 417 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 CARD8Q9Y2G2 431 aa12.6□□□□□ -0.39
TUBB3-202ENST00000553656 CENPVL1A0A0U1RR11 272 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 OR14I1A6ND48 311 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 C17orf51A8MQB3 221 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 AQP7O14520 342 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 ADAM10O14672 748 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 EIF4E2O60573 245 aaKnown RBP12.59□□□□□ -0.39
TUBB3-202ENST00000553656 PGM3O95394 542 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 UBTFL6P0CB48 400 aaPredicted RBP12.59□□□□□ -0.39
TUBB3-202ENST00000553656 HK1P19367 917 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 TCEA1P23193 301 aaKnown RBP12.59□□□□□ -0.39
TUBB3-202ENST00000553656 PTGS2P35354 604 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 CPA2P48052 419 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 MNAT1P51948 309 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 MXRA7P84157 204 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 ZNF117Q03924 483 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 KRT72Q14CN4 511 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 MAPK14Q16539 360 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 EIPR1Q53HC9 387 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 WIPI1Q5MNZ9 446 aaPredicted RBP12.59□□□□□ -0.39
TUBB3-202ENST00000553656 RAET1LQ5VY80 246 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 AAGABQ6PD74 315 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 YRDCQ86U90 279 aaKnown RBP12.59□□□□□ -0.39
TUBB3-202ENST00000553656 SPPL2CQ8IUH8 684 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 CMIPQ8IY22 773 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 C10orf111Q8N326 155 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 TOR1AIP2Q8NFQ8 470 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 OR52P1PQ8NH57 321 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 NEIL3Q8TAT5 605 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 SARAFQ96BY9 339 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 C1GALT1C1Q96EU7 318 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 SFXN2Q96NB2 322 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 ZNF607Q96SK3 696 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 SPATA5L1Q9BVQ7 753 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 OR2B2Q9GZK3 357 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms