RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 CACNG6Q9BXT2 260 aa16.35■□□□□ 0.21
SYNE3-202ENST00000553340 MED20Q9H944 212 aa16.35■□□□□ 0.21
SYNE3-202ENST00000553340 KLHL1Q9NR64 748 aa16.35■□□□□ 0.21
SYNE3-202ENST00000553340 SLC7A7Q9UM01 511 aa16.35■□□□□ 0.21
SYNE3-202ENST00000553340 RNF215Q9Y6U7 377 aa16.35■□□□□ 0.21
SYNE3-202ENST00000553340 CISD3P0C7P0 127 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 CLCNKAP51800 687 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 C18orf63Q68DL7 685 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 SLC48A1Q6P1K1 146 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 ADGRD2Q7Z7M1 963 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 GPALPP1Q8IXQ4 340 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 OR9A2Q8NGT5 310 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 ABHD4Q8TB40 342 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 BRIX1Q8TDN6 353 aaKnown RBP16.34■□□□□ 0.21
SYNE3-202ENST00000553340 ADAMTS14Q8WXS8 1223 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 HGDQ93099 445 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 MS4A6EQ96DS6 147 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 CLEC4MQ9H2X3 399 aaPredicted RBP16.34■□□□□ 0.21
SYNE3-202ENST00000553340 OR52D1Q9H346 318 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 PRDM7Q9NQW5 492 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 INPP5EQ9NRR6 644 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 STON1Q9Y6Q2 735 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 A0A0G2JK05 382 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 A0A1B0GVI7 797 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 CXCL14O95715 111 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 ZGLP1P0C6A0 271 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 PTNP21246 168 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 TBXA2RP21731 343 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 HSF2Q03933 536 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 SLC3A1Q07837 685 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 ZIC1Q15915 447 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 PRPF38BQ5VTL8 546 aaKnown RBP16.34■□□□□ 0.21
SYNE3-202ENST00000553340 MRM1Q6IN84 353 aaKnown RBP16.34■□□□□ 0.21
SYNE3-202ENST00000553340 ABHD17CQ6PCB6 329 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 SIAH3Q8IW03 269 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 ADAMTS15Q8TE58 950 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 WFIKKN2Q8TEU8 576 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 ZSWIM3Q96MP5 696 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 ACTRT3Q9BYD9 372 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 UCKL1Q9NWZ5 548 aa16.34■□□□□ 0.21
SYNE3-202ENST00000553340 UNC119BA6NIH7 251 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 C4orf51C9J302 202 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 I3L521 148 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 FGF18O76093 207 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 ZIC2O95409 532 aaPredicted RBP16.33■□□□□ 0.21
SYNE3-202ENST00000553340 IFNA7P01567 189 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 CD3GP09693 182 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 F3P13726 295 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 ATP5A1P25705 553 aaKnown RBP16.33■□□□□ 0.21
SYNE3-202ENST00000553340 BCL6P41182 706 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 PDX1P52945 283 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 SRP54P61011 504 aaKnown RBP16.33■□□□□ 0.21
SYNE3-202ENST00000553340 STXBP1P61764 594 aaKnown RBP16.33■□□□□ 0.21
SYNE3-202ENST00000553340 DEFB103AP81534 67 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 PITPNAQ00169 270 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 SNTA1Q13424 505 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 FGFBP1Q14512 234 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 CXorf40AQ8TE69 158 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 YIPF5Q969M3 257 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 FERD3LQ96RJ6 166 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 ERVMER34-1Q9H9K5 563 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 CACYBPQ9HB71 228 aaKnown RBP16.33■□□□□ 0.21
SYNE3-202ENST00000553340 CES1P1Q9UKY3 287 aa16.33■□□□□ 0.21
SYNE3-202ENST00000553340 E9PI62 339 aa16.33■□□□□ 0.2
SYNE3-202ENST00000553340 REM1O75628 298 aa16.33■□□□□ 0.2
SYNE3-202ENST00000553340 UBL3O95164 117 aa16.33■□□□□ 0.2
SYNE3-202ENST00000553340 FGF19O95750 216 aa16.33■□□□□ 0.2
SYNE3-202ENST00000553340 BMP7P18075 431 aa16.33■□□□□ 0.2
SYNE3-202ENST00000553340 TAS2R43P59537 309 aa16.33■□□□□ 0.2
SYNE3-202ENST00000553340 DHCR24Q15392 516 aa16.33■□□□□ 0.2
SYNE3-202ENST00000553340 SLC25A35Q3KQZ1 300 aa16.33■□□□□ 0.2
SYNE3-202ENST00000553340 TMEM52BQ4KMG9 183 aa16.33■□□□□ 0.2
SYNE3-202ENST00000553340 OR2A1Q8NGT9 310 aa16.33■□□□□ 0.2
SYNE3-202ENST00000553340 FANK1Q8TC84 345 aa16.33■□□□□ 0.2
SYNE3-202ENST00000553340 DACT3Q96B18 629 aaPredicted RBP16.33■□□□□ 0.2
SYNE3-202ENST00000553340 ZNF443Q9Y2A4 671 aaPredicted RBP16.33■□□□□ 0.2
SYNE3-202ENST00000553340 HCFC2Q9Y5Z7 792 aa16.33■□□□□ 0.2
SYNE3-202ENST00000553340 MMP15P51511 669 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 RAG2P55895 527 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 RPS7P62081 194 aaKnown RBP16.32■□□□□ 0.2
SYNE3-202ENST00000553340 E2F1Q01094 437 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 POU4F3Q15319 338 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 PUS10Q3MIT2 529 aaKnown RBP16.32■□□□□ 0.2
SYNE3-202ENST00000553340 ADAMTSL4Q6UY14 1074 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 OR6C4Q8NGE1 309 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 SLC35A4Q96G79 324 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 CCDC120Q96HB5 630 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 ZFP3Q96NJ6 502 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 CD180Q99467 661 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 DPCDQ9BVM2 203 aaPredicted RBP16.32■□□□□ 0.2
SYNE3-202ENST00000553340 DPH1Q9BZG8 443 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 MOSPD1Q9UJG1 213 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 TMEM5Q9Y2B1 443 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 NPFFR2Q9Y5X5 522 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 ZNF780BQ9Y6R6 833 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 MEIKINA0A087WXM9 373 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 SLC22A31A6NKX4 558 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 DUXAA6NLW8 204 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 GPR171O14626 319 aa16.32■□□□□ 0.2
SYNE3-202ENST00000553340 H2AFB2P0C5Z0 115 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms