RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 OR9Q2Q8NGE9 314 aa3.63□□□□□ -1.83
ATXN3-217ENST00000553287 WDR36Q8NI36 951 aaKnown RBP3.63□□□□□ -1.83
ATXN3-217ENST00000553287 TYMSOSQ8TAI1 123 aa3.63□□□□□ -1.83
ATXN3-217ENST00000553287 LMX1AQ8TE12 382 aa3.63□□□□□ -1.83
ATXN3-217ENST00000553287 TMA16Q96EY4 203 aaKnown RBP3.63□□□□□ -1.83
ATXN3-217ENST00000553287 EPSTI1Q96J88 318 aa3.63□□□□□ -1.83
ATXN3-217ENST00000553287 RMDN2Q96LZ7 410 aa3.63□□□□□ -1.83
ATXN3-217ENST00000553287 ACCSQ96QU6 501 aa3.63□□□□□ -1.83
ATXN3-217ENST00000553287 NAA11Q9BSU3 229 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-217ENST00000553287 SLC25A23Q9BV35 468 aa3.63□□□□□ -1.83
ATXN3-217ENST00000553287 PAPOLGQ9BWT3 736 aaKnown RBP3.63□□□□□ -1.83
ATXN3-217ENST00000553287 RAB34Q9BZG1 259 aa3.63□□□□□ -1.83
ATXN3-217ENST00000553287 CSNK1G1Q9HCP0 422 aa3.63□□□□□ -1.83
ATXN3-217ENST00000553287 NKIRAS2Q9NYR9 191 aa3.63□□□□□ -1.83
ATXN3-217ENST00000553287 NOL7Q9UMY1 257 aaKnown RBP3.63□□□□□ -1.83
ATXN3-217ENST00000553287 NIPBLQ6KC79 2804 aaeCLIP3.62□□□□□ -1.83
ATXN3-217ENST00000553287 SPTBN1Q01082 2364 aaKnown RBP3.62□□□□□ -1.83
ATXN3-217ENST00000553287 SDK2Q58EX2 2172 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 TRAV18A0A075B6X5 111 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 ZNF233A6NK53 670 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 A8MXE2 369 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 H3BMM5 538 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 YKT6O15498 198 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 LATO43561 262 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 TIMM44O43615 452 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 KIF5CO60282 957 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 REC8O95072 547 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 CALCAP01258 141 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 FAM200BP0CF97 657 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 ALPPL2P10696 532 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 LIPCP11150 499 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 CCL4P13236 92 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 CASP1P29466 404 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 KHKP50053 298 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 ST8SIA6P61647 398 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 YWHAGP61981 247 aaKnown RBP eCLIP3.62□□□□□ -1.83
ATXN3-217ENST00000553287 FZD2Q14332 565 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 RASA2Q15283 850 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 TAZQ16635 292 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 DEFB109BQ30KR1 87 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 ZNF699Q32M78 642 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 FAM174BQ3ZCQ3 159 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 FAM133BQ5BKY9 247 aaKnown RBP3.62□□□□□ -1.83
ATXN3-217ENST00000553287 TCP11X2Q5H9J9 407 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 LRRC73Q5JTD7 316 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 FHL5Q5TD97 284 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 KCTD16Q68DU8 428 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 REG3GQ6UW15 175 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 PPP1R21Q6ZMI0 780 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 MACC1Q6ZN28 852 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 KRT74Q7RTS7 529 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 KCNMB4Q86W47 210 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 WDR49Q8IV35 697 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 OR5M9Q8NGP3 310 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 DNAJC19Q96DA6 116 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 BMFQ96LC9 184 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 CCDC28BQ9BUN5 200 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 TXLNGYQ9BZA5 131 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 ST6GALNAC4Q9H4F1 302 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 FBXO44Q9H4M3 255 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 RABEP2Q9H5N1 569 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 EXOC1Q9NV70 894 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 SUN2Q9UH99 717 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 XPO7Q9UIA9 1087 aaKnown RBP3.62□□□□□ -1.83
ATXN3-217ENST00000553287 ZNF107Q9UII5 783 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-217ENST00000553287 PILRAQ9UKJ1 303 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 ERVW-1Q9UQF0 538 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 TP53TG5Q9Y2B4 290 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 LIPGQ9Y5X9 500 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 MRPS18BQ9Y676 258 aaKnown RBP3.62□□□□□ -1.83
ATXN3-217ENST00000553287 ATP8B3O60423 1300 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 MED13Q9UHV7 2174 aa3.62□□□□□ -1.83
ATXN3-217ENST00000553287 ZNF106Q9H2Y7 1883 aaKnown RBP3.61□□□□□ -1.83
ATXN3-217ENST00000553287 LRRIQ3A6PVS8 624 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-217ENST00000553287 YJEFN3A6XGL0 299 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 TMEM150CB9EJG8 249 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 E7ENQ6 273 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 PRAMEF26H0Y7S4 382 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 K7ERQ8 282 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 AQP9O43315 295 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 TNFSF12O43508 249 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 MOCS2O96007 188 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-217ENST00000553287 MT-ND2P03891 347 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 GP1BAP07359 652 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 CTSLP07711 333 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 ADORA3P0DMS8 318 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 RALAP11233 206 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 ZNF18P17022 549 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 OAS2P29728 719 aaKnown RBP3.61□□□□□ -1.83
ATXN3-217ENST00000553287 SSTR1P30872 391 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 FEN1P39748 380 aaKnown RBP3.61□□□□□ -1.83
ATXN3-217ENST00000553287 PRPHP41219 470 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 ABCE1P61221 599 aaKnown RBP3.61□□□□□ -1.83
ATXN3-217ENST00000553287 SRPXP78539 464 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 CYP24A1Q07973 514 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 IL10RBQ08334 325 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 ORC2Q13416 577 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-217ENST00000553287 TOMM20Q15388 145 aa3.61□□□□□ -1.83
ATXN3-217ENST00000553287 SNRNP35Q16560 246 aaKnown RBP3.61□□□□□ -1.83
ATXN3-217ENST00000553287 SPANXN4Q5MJ08 99 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms