RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 IL18R1Q13478 541 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 CYLC2Q14093 348 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-209ENST00000553280 ABRAXAS2Q15018 415 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 SLC5A12Q1EHB4 618 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 MICAQ29983 383 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 KCTD21Q4G0X4 260 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 OR8G2PQ6IF36 304 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 ADAM5Q6NVV9 412 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 FAHD2BQ6P2I3 314 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-209ENST00000553280 DOK6Q6PKX4 331 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 TAS2R42Q7RTR8 314 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 MOB3BQ86TA1 216 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 CDH26Q8IXH8 852 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 LINC01561Q8N1V8 128 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 C15orf54Q8N8G6 183 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 OR56B2PQ8NGI1 322 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 FBXO32Q969P5 355 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 FAHD2AQ96GK7 314 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 C18orf12Q96KH6 178 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 SLC39A3Q9BRY0 314 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 TRIM51Q9BSJ1 452 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 TUBGCP2Q9BSJ2 902 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 PANK3Q9H999 370 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 NMRK1Q9NWW6 199 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 OARD1Q9Y530 152 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 MAD1L1Q9Y6D9 718 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 KANK1Q14678 1352 aa4.02□□□□□ -1.77
SCFD1-209ENST00000553280 A0A0U1RQS6 177 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 A0A1B0GTH9 108 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 FCMRO60667 390 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 TSC22D2O75157 780 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 SERPINB2P05120 415 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 H2AFZP0C0S5 128 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 RNF224P0DH78 156 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 P2RY1P47900 373 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 ACTR3P61158 418 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 RPL23AP62750 156 aaKnown RBP4.01□□□□□ -1.77
SCFD1-209ENST00000553280 OTUD4Q01804 1114 aaKnown RBP4.01□□□□□ -1.77
SCFD1-209ENST00000553280 RAB40BQ12829 278 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 ZNF154Q13106 437 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 DPYSL3Q14195 570 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 NDUFA9Q16795 377 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 MEDAGQ5VYS4 303 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 ZNF57Q68EA5 555 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-209ENST00000553280 PVRIGQ6DKI7 326 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 KCNIP4Q6PIL6 250 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 REG3GQ6UW15 175 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 OR1F12Q8NHA8 337 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 BADQ92934 168 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 TPD52L3Q96J77 140 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 NPY6RQ99463 290 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 HCAR1Q9BXC0 346 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 FANCFQ9NPI8 374 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 SENP1Q9P0U3 644 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 CDH9Q9ULB4 789 aa4.01□□□□□ -1.77
SCFD1-209ENST00000553280 ATP10AO60312 1499 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 HELTA6NFD8 242 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 ZNF487B1APH4 448 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 SRPX2O60687 465 aaPredicted RBP4□□□□□ -1.77
SCFD1-209ENST00000553280 ECI2O75521 394 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 LRATO95237 230 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 RENP00797 406 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 CA1P00915 261 aaPredicted RBP4□□□□□ -1.77
SCFD1-209ENST00000553280 UMPSP11172 480 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 MMP11P24347 488 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 GDI1P31150 447 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 ALDH3B2P48448 385 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 CASP4P49662 377 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 ARHGDIBP52566 201 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 ATP5IP56385 69 aaPredicted RBP4□□□□□ -1.77
SCFD1-209ENST00000553280 ERVK11-1P61568 191 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 RND3P61587 244 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 PUDPQ08623 228 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 PEX6Q13608 980 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 LAGE3Q14657 143 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 LTB4RQ15722 352 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 KRTAP27-1Q3LI81 207 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 TEX44Q53QW1 395 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 NHLRC3Q5JS37 347 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 CCDC80Q76M96 950 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 OR9A4Q8NGU2 314 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 OR4Q3Q8NH05 313 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 ZNF671Q8TAW3 534 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 TFB1MQ8WVM0 346 aaKnown RBP4□□□□□ -1.77
SCFD1-209ENST00000553280 ZBP1Q9H171 429 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 OPN3Q9H1Y3 402 aaPredicted RBP4□□□□□ -1.77
SCFD1-209ENST00000553280 ADNPQ9H2P0 1102 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 LRRN3Q9H3W5 708 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 IKZF5Q9H5V7 419 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 IMPAD1Q9NX62 359 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 SIGLEC8Q9NYZ4 499 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 WRAP73Q9P2S5 460 aaPredicted RBP4□□□□□ -1.77
SCFD1-209ENST00000553280 RASD1Q9Y272 281 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 ALG6Q9Y672 507 aa4□□□□□ -1.77
SCFD1-209ENST00000553280 A0A1W2PPR1 153 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 TAPBPO15533 448 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 N4BP1O75113 896 aaKnown RBP3.99□□□□□ -1.77
SCFD1-209ENST00000553280 HPP00738 406 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 ALPIP09923 528 aa3.99□□□□□ -1.77
SCFD1-209ENST00000553280 CT45A10P0DMU9 189 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms