RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 RFWD2Q8NHY2 731 aa10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 PIWIL2Q8TC59 973 aaKnown RBP10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 PROX1Q92786 737 aa10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 TMBIM1Q969X1 311 aa10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 S100PBPQ96BU1 408 aa10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 TMEM237Q96Q45 408 aa10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 ATOH8Q96SQ7 321 aa10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 MTERF1Q99551 399 aaKnown RBP10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 CENPKQ9BS16 269 aa10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 SHCBP1LQ9BZQ2 653 aa10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 CD244Q9BZW8 370 aa10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 DSN1Q9H410 356 aa10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 NPHS2Q9NP85 383 aa10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 FANCFQ9NPI8 374 aa10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 OXSMQ9NWU1 459 aa10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 CES1P1Q9UKY3 287 aa10.12□□□□□ -0.79
SUPT16H-202ENST00000552829 SHISA9B4DS77 424 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 SEC14L5O43304 696 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 CCNT2O60583 730 aaKnown RBP10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 KERAO60938 352 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 SNNO75324 88 aaPredicted RBP10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 REM1O75628 298 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 HSPA4LO95757 839 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 ATP1B1P05026 303 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 FESP07332 822 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 TROVE2P10155 538 aaKnown RBP eCLIP10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 GFAPP14136 432 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 HK1P19367 917 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 ARRB2P32121 409 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 GZMKP49863 264 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 ABCE1P61221 599 aaKnown RBP10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 RPS3AP61247 264 aaKnown RBP10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 BSPH1Q075Z2 132 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 CUL3Q13618 768 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 DDX39BQ13838 428 aaKnown RBP10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 TAB1Q15750 504 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 TMEM44Q2T9K0 475 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 FAM219BQ5XKK7 198 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 FAM166AQ6J272 317 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 CYP20A1Q6UW02 462 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 GGNQ86UU5 652 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 GABRG1Q8N1C3 465 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 RFLNBQ8N5W9 214 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 CCDC197Q8NCU1 140 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 OR4K17Q8NGC6 315 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 SGMS2Q8NHU3 365 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 AGR3Q8TD06 166 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 C10orf105Q8TEF2 133 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 ADAD1Q96M93 576 aaKnown RBP10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 BTBD9Q96Q07 612 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 ADOQ96SZ5 270 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 HDHD5Q9BXW7 423 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 C20orf27Q9GZN8 174 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 ZBTB26Q9HCK0 441 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 NGBQ9NPG2 151 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 CISD1Q9NZ45 108 aaKnown RBP10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 BCAP29Q9UHQ4 241 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 KCNS2Q9ULS6 477 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 CLEC4AQ9UMR7 237 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 AP4B1Q9Y6B7 739 aa10.11□□□□□ -0.79
SUPT16H-202ENST00000552829 TMEM114B3SHH9 223 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 KLF11O14901 512 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 SNX3O60493 162 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 RAMP1O60894 148 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 CHRNGP07510 517 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 CT45A8P0DMV1 189 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 CT45A9P0DMV2 189 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 EPB42P16452 691 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 TSPAN8P19075 237 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 USF1P22415 310 aaPredicted RBP10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 PRKAA2P54646 552 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 CTBP2P56545 445 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 DUSP2Q05923 314 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 EFR3AQ14156 821 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 GANABQ14697 944 aaKnown RBP10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 PFKFB4Q16877 469 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 FAM174BQ3ZCQ3 159 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 GLYR1Q49A26 553 aaPredicted RBP10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 CT45A2Q5DJT8 189 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 CFAP157Q5JU67 520 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 C6orf163Q5TEZ5 329 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 GKAP1Q5VSY0 366 aaPredicted RBP10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 RAET1LQ5VY80 246 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 FIGNL1Q6PIW4 674 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 PIGWQ7Z7B1 504 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 ZNF525Q8N782 197 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 ADCY4Q8NFM4 1077 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 OR5M1Q8NGP8 315 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 STAG3L4Q8TBR4 150 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 UBTD2Q8WUN7 234 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 HSD17B8Q92506 261 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 GFM2Q969S9 779 aaKnown RBP10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 ADGRG7Q96K78 797 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 C7orf26Q96N11 449 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 SORT1Q99523 831 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 CACNG6Q9BXT2 260 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 GLRX2Q9NS18 164 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 PNPOQ9NVS9 261 aa10.1□□□□□ -0.79
SUPT16H-202ENST00000552829 THAP1Q9NVV9 213 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms