RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 CD226Q15762 336 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 GTDC1Q4AE62 458 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 METTL21CQ5VZV1 264 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 FUNDC1Q8IVP5 155 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 TMCO5AQ8N6Q1 288 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 OR10Q1Q8NGQ4 319 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 B4GALNT2Q8NHY0 566 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 GTF2H4Q92759 462 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 PIGQQ9BRB3 760 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 RAD21L1Q9H4I0 556 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 TPT1P8Q9HAU6 139 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 MRGBPQ9NV56 204 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 MKLN1Q9UL63 735 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 VDAC3Q9Y277 283 aa16.76■□□□□ 0.27
PRPF40B-216ENST00000552301 PHF3Q92576 2039 aaKnown RBP16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 NCOA6Q14686 2063 aaPredicted RBP16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 A0A087WZY1 265 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 A0A096LPI6 279 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 TMEM247A6NEH6 219 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 B4DXG7 233 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 NPIPB9F8W1W9 429 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 KIAA0513O60268 411 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 ZIC3O60481 467 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 TNFRSF21O75509 655 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 NUDT14O95848 222 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 NR2F1P10589 423 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 GP1BBP13224 206 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 POU3F2P20265 443 aaPredicted RBP16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 CRATP43155 626 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 RNF144AP50876 292 aaPredicted RBP16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 GFRA1P56159 465 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 NUP107P57740 925 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 SRYQ05066 204 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 SF3A3Q12874 501 aaKnown RBP eCLIP16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 KLHL26Q53HC5 615 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 DCST1Q5T197 706 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 PDZK1Q5T2W1 519 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 ZNF619Q8N2I2 560 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 RPRMLQ8N4K4 120 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 ASB5Q8WWX0 329 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 AURKBQ96GD4 344 aaPredicted RBP16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 WDYHV1Q96HA8 205 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 TTYH2Q9BSA4 534 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 SLC6A13Q9NSD5 602 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 P2RX2Q9UBL9 471 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 FAM215AQ9Y5M1 114 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 HECTD1Q9ULT8 2610 aa16.75■□□□□ 0.27
PRPF40B-216ENST00000552301 SERINC4A6NH21 518 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 LINC01387J3KSC0 135 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 ANGPT2O15123 496 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 FCMRO60667 390 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 UBL4AP11441 157 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 CAPN3P20807 821 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 CCR4P51679 360 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 SUMO3P55854 103 aaPredicted RBP16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 DSTNP60981 165 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 ART3Q13508 389 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 ZNF141Q15928 474 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 GLYR1Q49A26 553 aaPredicted RBP16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 ACSF3Q4G176 576 aaPredicted RBP16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 COX20Q5RI15 118 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 TYW3Q6IPR3 259 aaKnown RBP16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 ARSKQ6UWY0 536 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 OLIG3Q7RTU3 272 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 MARVELD2Q8N4S9 558 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 CA5BP1Q8WTZ4 195 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 OIT3Q8WWZ8 545 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 TRNT1Q96Q11 434 aaKnown RBP16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 PAIP1Q9H074 479 aaKnown RBP16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 THUMPD1Q9NXG2 353 aaKnown RBP16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 STOML1Q9UBI4 398 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 CARD8Q9Y2G2 431 aa16.74■□□□□ 0.27
PRPF40B-216ENST00000552301 A0A1W2PP18 115 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 OR2M5A3KFT3 312 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 PRSS44E7EML9 344 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 H3BML4 177 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 DYNC1I1O14576 645 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 CYP7B1O75881 506 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 H6PDO95479 791 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 CLDN14O95500 239 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 CLDN1O95832 211 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 C1QCP02747 245 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 GUSBP08236 651 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 GLI4P10075 376 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 PEPDP12955 493 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 PPIBP23284 216 aaKnown RBP16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 STARP49675 285 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 ZNF117Q03924 483 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 FUT5Q11128 374 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 RTL6Q6ICC9 239 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 FRRS1Q6ZNA5 592 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 CHMP1BQ7LBR1 199 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 LACC1Q8IV20 430 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 MEIOBQ8N635 442 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 ANKFN1Q8N957 763 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 OR5M1Q8NGP8 315 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 SMPDL3BQ92485 455 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 ZBTB8AQ96BR9 441 aa16.73■□□□□ 0.27
PRPF40B-216ENST00000552301 TRIB1Q96RU8 372 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms