RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 CMTM3Q96MX0 182 aa4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 PTCHD1Q96NR3 888 aa4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 MAP3K3Q99759 626 aa4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 MRPL45Q9BRJ2 306 aaKnown RBP4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 PDCD2LQ9BRP1 358 aa4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 FDXACB1Q9BRP7 624 aaPredicted RBP4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 DOHHQ9BU89 302 aa4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 FICDQ9BVA6 458 aa4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 IFT27Q9BW83 186 aa4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 SEC11CQ9BY50 192 aa4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 POLDIP3Q9BY77 421 aaKnown RBP4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 MRPL37Q9BZE1 423 aaKnown RBP4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 SLC38A1Q9H2H9 487 aa4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 FZD8Q9H461 694 aa4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 SEMA4BQ9NPR2 832 aaPredicted RBP4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 DHCR7Q9UBM7 475 aaKnown RBP4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 CLEC4AQ9UMR7 237 aa4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 CLCA2Q9UQC9 943 aa4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 GSTK1Q9Y2Q3 226 aa4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 YARS2Q9Y2Z4 477 aaKnown RBP4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 POLR3HQ9Y535 204 aaPredicted RBP4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 PARP14Q460N5 1801 aa4.94□□□□□ -1.62
LSM3P2-201ENST00000551246 IGKV6-21A0A0C4DH24 114 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 A0A1W2PRB8 838 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 IRGMA1A4Y4 181 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 FITM1A5D6W6 292 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 C2orf78A6NCI8 922 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 NAP1L6A6NFF2 107 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 GLTPD2A6NH11 291 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 DDTLA6NHG4 134 aaPredicted RBP4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 SMCHD1A6NHR9 2005 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 RFPL4AA6NLU0 287 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 MARCH11A6NNE9 402 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 ARHGEF33A8MVX0 844 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 DISC1C4P0D8 188 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 C5orf58C9J3I9 102 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 RFPL4AL1F8VTS6 287 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 M0QYT0 321 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 M0R129 80 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 TLR4O00206 839 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 CACNB4O00305 520 aaPredicted RBP4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 TOX3O15405 576 aaPredicted RBP4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 LDB2O43679 373 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 KRT33AO76009 404 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 KDM4BO94953 1096 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 UBL3O95164 117 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 SIX6O95475 246 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 FGF19O95750 216 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 ZNF682O95780 498 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 ADAP00813 363 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 IGF2P01344 180 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 C1QCP02747 245 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 SERPINA5P05154 406 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 SERPIND1P05546 499 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 EIF4EP06730 217 aaKnown RBP4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 ASGR2P07307 311 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 HOXB5P09067 269 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 LIMS3P0CW19 117 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 LIMS4P0CW20 117 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 PRPS2P11908 318 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 BCKDHAP12694 445 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 OSMP13725 252 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 HOXA5P20719 270 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 GIFP27352 417 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 GKP32189 559 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 NPBWR1P48145 328 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 AGTR2P50052 363 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 CCR9P51686 369 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 MVDP53602 400 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 PNLIPRP2P54317 469 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 WNT3AP56704 352 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 NUTF2P61970 127 aaKnown RBP4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 PPIAP62937 165 aaKnown RBP4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 SELENOWP63302 87 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 PITX1P78337 314 aaPredicted RBP4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 FZD5Q13467 585 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 TDGQ13569 410 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 KRT33BQ14525 404 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 IHHQ14623 411 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 ABRAXAS2Q15018 415 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 IRF4Q15306 451 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 TESK1Q15569 626 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 ZNF239Q16600 458 aaKnown RBP4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 UGT8Q16880 541 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 PRSS53Q2L4Q9 553 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 AARDQ4LEZ3 155 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 GPRC6AQ5T6X5 926 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 AADACL4Q5VUY2 407 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 TMEM244Q5VVB8 128 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 LIPJQ5W064 366 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 ZNF626Q68DY1 528 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 TMEM88Q6PEY1 159 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 MPZL3Q6UWV2 235 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 ANGPTL8Q6UXH0 198 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 BAIAP2L2Q6UXY1 529 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 TMIGD1Q6UXZ0 262 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 PTCHD4Q6ZW05 846 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 SSX9Q7RTT3 188 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 GPRIN1Q7Z2K8 1008 aa4.93□□□□□ -1.62
LSM3P2-201ENST00000551246 TRMT1LQ7Z2T5 733 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms