RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 LCA5Q86VQ0 697 aa8.77□□□□□ -1.01
TRAFD1-207ENST00000550051 PIWIL2Q8TC59 973 aaKnown RBP8.77□□□□□ -1.01
TRAFD1-207ENST00000550051 NPAS1Q99742 590 aa8.77□□□□□ -1.01
TRAFD1-207ENST00000550051 TSPYL1Q9H0U9 437 aa8.77□□□□□ -1.01
TRAFD1-207ENST00000550051 BARX1Q9HBU1 254 aaPredicted RBP8.77□□□□□ -1.01
TRAFD1-207ENST00000550051 DDX18Q9NVP1 670 aaKnown RBP8.77□□□□□ -1.01
TRAFD1-207ENST00000550051 PLA2G2EQ9NZK7 142 aa8.77□□□□□ -1.01
TRAFD1-207ENST00000550051 NTMQ9P121 344 aa8.77□□□□□ -1.01
TRAFD1-207ENST00000550051 VDAC3Q9Y277 283 aa8.77□□□□□ -1.01
TRAFD1-207ENST00000550051 STK38LQ9Y2H1 464 aa8.77□□□□□ -1.01
TRAFD1-207ENST00000550051 A0A1W2PRB8 838 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 GXYLT2A0PJZ3 443 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 DPRXA6NFQ7 191 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 TRIM49D1C9J1S8 452 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 TNFSF11O14788 317 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 DLX3O60479 287 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 NKX2-2O95096 273 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 IGHV4-39P01824 125 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 OPN1LWP04000 364 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 PRPS2P11908 318 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 ME2P23368 584 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 THBS2P35442 1172 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 EIF1P41567 113 aaKnown RBP8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 HTR6P50406 440 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 PRKAA2P54646 552 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 MANFP55145 182 aaKnown RBP8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 SLC18A2Q05940 514 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 BTKQ06187 659 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 ITGADQ13349 1161 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 SLC29A2Q14542 456 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 TAB1Q15750 504 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 PLPPR5Q32ZL2 321 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 CHRFAM7AQ494W8 412 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 GLE1Q53GS7 698 aaKnown RBP8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 SPDYAQ5MJ70 313 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 TMEM201Q5SNT2 666 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 TEX35Q5T0J7 233 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 UBAP2Q5T6F2 1119 aaKnown RBP8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 FIGNL1Q6PIW4 674 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 SEZ6L2Q6UXD5 910 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 TIFABQ6ZNK6 161 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 TRIM46Q7Z4K8 759 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 DTX2Q86UW9 622 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 MISPQ8IVT2 679 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 LILRA2Q8N149 483 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 MMGT1Q8N4V1 131 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 CEP70Q8NHQ1 597 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 POC1BQ8TC44 478 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 RNF128Q8TEB7 428 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 DCAKDQ8WVC6 231 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 ROBO4Q8WZ75 1007 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 L3HYPDHQ96EM0 354 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 METTL2AQ96IZ6 378 aaKnown RBP8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 RNF145Q96MT1 663 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 PAFAH2Q99487 392 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 EBPLQ9BY08 206 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 TRIM2Q9C040 744 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 C12orf49Q9H741 205 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 MYNNQ9NPC7 610 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 TIGARQ9NQ88 270 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 MIEF1Q9NQG6 463 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 UBQLN4Q9NRR5 601 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 MED17Q9NVC6 651 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 TMEM216Q9P0N5 145 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 TIMM22Q9Y584 194 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 MAGED1Q9Y5V3 778 aaPredicted RBP8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 CADP27708 2225 aa8.76□□□□□ -1.01
TRAFD1-207ENST00000550051 A0A1W2PP18 115 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 ESYT3A0FGR9 886 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 CLOCKO15516 846 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 EFNA2O43921 213 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 GMFGO60234 142 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 ADAM11O75078 769 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 PRKD3O94806 890 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 OXSR1O95747 527 aaPredicted RBP8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 YES1P07947 543 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 SNRPAP09012 282 aaKnown RBP8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 LINGO3P0C6S8 592 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 FAM157CP0CG43 387 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 IL32P24001 234 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 ATP5F1P24539 256 aaPredicted RBP8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 NTSP30990 170 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 CDKN1AP38936 164 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 RFX3P48380 749 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 ZNF41P51814 821 aaPredicted RBP8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 SLC7A5Q01650 507 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 LCP2Q13094 533 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 NRF1Q16656 503 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 VPS26BQ4G0F5 336 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 PPP4R4Q6NUP7 873 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 ZCCHC12Q6PEW1 402 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 TFAP2EQ6VUC0 442 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 IKBIPQ70UQ0 350 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 SSX8Q7RTT4 187 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 NUFIP2Q7Z417 695 aaKnown RBP8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 TDRPQ86YL5 185 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 SLC22A9Q8IVM8 553 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 CDRT4Q8N9R6 151 aa8.75□□□□□ -1.01
TRAFD1-207ENST00000550051 OR10H5Q8NGA6 315 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms