RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 PHOSPHO1Q8TCT1 267 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 ZFP90Q8TF47 636 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 GTF2H4Q92759 462 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 ROPN1LQ96C74 230 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 SH3YL1Q96HL8 342 aaPredicted RBP16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 SIKE1Q9BRV8 207 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 NMUR2Q9GZQ4 415 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 ZNF350Q9GZX5 532 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 CCDC167Q9P0B6 97 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 MKLN1Q9UL63 735 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 DTNAQ9Y4J8 743 aa16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 KLF2Q9Y5W3 355 aaPredicted RBP16.96■□□□□ 0.31
PRPF40B-206ENST00000547764 A0A0G2JND7 137 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 PRAMEF27A3QJZ7 478 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 HCRTR2O43614 444 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 KRT75O95678 551 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 EPPINO95925 133 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 HTR1EP28566 365 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 ADH7P40394 386 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 IRX1P78414 480 aaPredicted RBP16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 GUCY1A3Q02108 690 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 FUT5Q11128 374 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 SQLEQ14534 574 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 ZNF630Q2M218 657 aaPredicted RBP16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 GLYR1Q49A26 553 aaPredicted RBP16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 GTDC1Q4AE62 458 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 COX20Q5RI15 118 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 C6orf10Q5SRN2 563 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 SLC2A7Q6PXP3 512 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 ZNF614Q8N883 585 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 B4GALNT2Q8NHY0 566 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 CA5BP1Q8WTZ4 195 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 ASB5Q8WWX0 329 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 KLHDC3Q9BQ90 382 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 KCNE5Q9UJ90 142 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 VDAC3Q9Y277 283 aa16.95■□□□□ 0.3
PRPF40B-206ENST00000547764 A0A0G2JNJ9 132 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 OR2M5A3KFT3 312 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 H3BNH8 94 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 NR5A2O00482 541 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 OIP5O43482 229 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 TOXO94900 526 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 GUSBP08236 651 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 CD1EP15812 388 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 ZNF708P17019 499 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 NCF2P19878 526 aaPredicted RBP16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 GRNP28799 593 aaKnown RBP16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 CHRNB4P30926 498 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 ANXA11P50995 505 aaKnown RBP16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 MVDP53602 400 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 CLDN18P56856 261 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 TXNL4AP83876 142 aaKnown RBP16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 ZNF117Q03924 483 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 SF3B4Q15427 424 aaKnown RBP eCLIP16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 ZNF141Q15928 474 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 AGKQ53H12 422 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 PDZK1Q5T2W1 519 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 AP1ARQ63HQ0 302 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 NSUN5P2Q63ZY6 315 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 TYW3Q6IPR3 259 aaKnown RBP16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 ZPLD1Q8TCW7 415 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 SPDL1Q96EA4 605 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 TRIB1Q96RU8 372 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 TUBA1CQ9BQE3 449 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 PIGQQ9BRB3 760 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 TPT1P8Q9HAU6 139 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 SLC52A3Q9NQ40 469 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 FGFR1OP2Q9NVK5 253 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 TMEM45AQ9NWC5 275 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 Q9UFV3 132 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 CARD8Q9Y2G2 431 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 ZNF337Q9Y3M9 751 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 WDR45Q9Y484 360 aa16.94■□□□□ 0.3
PRPF40B-206ENST00000547764 A0A087WZY1 265 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 CENPVL1A0A0U1RR11 272 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 SHISA8B8ZZ34 492 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 H0Y3Z8 333 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 LINC01387J3KSC0 135 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 GTPBP1O00178 669 aaKnown RBP16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 TNFRSF21O75509 655 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 UGT2B17O75795 530 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 CAPN3P20807 821 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 BCL2A1Q16548 175 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 TMEM44Q2T9K0 475 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 NDUFAF6Q330K2 333 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 GPAT3Q53EU6 434 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 RIPPLY2Q5TAB7 128 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 SP5Q6BEB4 398 aaPredicted RBP16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 CBLN3Q6UW01 205 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 FRRS1Q6ZNA5 592 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 LACC1Q8IV20 430 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 LILRB4Q8NHJ6 448 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 AURKBQ96GD4 344 aaPredicted RBP16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 PAIP1Q9H074 479 aaKnown RBP16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 SAP130Q9H0E3 1048 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 RABEP2Q9H5N1 569 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 ZNF385DQ9H6B1 395 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 CCDC134Q9H6E4 229 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 POLE3Q9NRF9 147 aa16.93■□□□□ 0.3
PRPF40B-206ENST00000547764 MED17Q9NVC6 651 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms