RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 PPIEQ9UNP9 301 aaKnown RBP12.42□□□□□ -0.42
PTCH1-215ENST00000547672 ASXL3Q9C0F0 2248 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 HRKO00198 91 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 PEX12O00623 359 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 FAM20BO75063 409 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 SEMA7AO75326 666 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 REM1O75628 298 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 HMGN1P05114 100 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 NAGAP17050 411 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 CHMP24386 653 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 FPR3P25089 353 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 POU1F1P28069 291 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 ELK4P28324 431 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 GSSP48637 474 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 IDH2P48735 452 aaKnown RBP12.41□□□□□ -0.42
PTCH1-215ENST00000547672 GPR143P51810 404 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 SNRPGP62308 76 aaKnown RBP12.41□□□□□ -0.42
PTCH1-215ENST00000547672 SEC23BQ15437 767 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 DCAF12Q5T6F0 453 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 PRAMEF17Q5VTA0 474 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 SLX4IPQ5VYV7 408 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 NPSR1Q6W5P4 371 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 HSDL2Q6YN16 418 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 ANKRD37Q7Z713 158 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 ZER1Q7Z7L7 766 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 ALDH16A1Q8IZ83 802 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 SLC34A3Q8N130 599 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 CYP4Z2PQ8N1L4 340 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 CLDN22Q8N7P3 220 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 B3GNT7Q8NFL0 401 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 OR8J1Q8NGP2 316 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 WDR36Q8NI36 951 aaKnown RBP12.41□□□□□ -0.42
PTCH1-215ENST00000547672 ADIPOR1Q96A54 375 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 VMP1Q96GC9 406 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 SLC38A2Q96QD8 506 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 NUDT9Q9BW91 350 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 TMEM9BQ9NQ34 198 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 MAN2C1Q9NTJ4 1040 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 SEMA4GQ9NTN9 838 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 OCIAD1Q9NX40 245 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 CTSFQ9UBX1 484 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 REV1Q9UBZ9 1251 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 SLC7A7Q9UM01 511 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 MED31Q9Y3C7 131 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 CHST2Q9Y4C5 530 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 PCDHGB1Q9Y5G3 927 aa12.41□□□□□ -0.42
PTCH1-215ENST00000547672 SPTBP11277 2137 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 A0A1W2PQD3 144 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 LNP1A1A4G5 178 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 IRGMA1A4Y4 181 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 OR2W5A6NFC9 320 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 EFCAB10A6NFE3 127 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 SAGE2PA6NJ88 616 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 PTGES3LE9PB15 166 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 ZNF701M0R085 212 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-215ENST00000547672 CHP2O43745 196 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 HYAL3O43820 417 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-215ENST00000547672 EIF4E2O60573 245 aaKnown RBP12.4□□□□□ -0.42
PTCH1-215ENST00000547672 TPST2O60704 377 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 NOL3O60936 208 aaKnown RBP12.4□□□□□ -0.42
PTCH1-215ENST00000547672 PPM1BO75688 479 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 RCBTB2O95199 551 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 CLPSP04118 112 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 PNMTP11086 282 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 MMP11P24347 488 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 SLC5A2P31639 672 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 GIPRP48546 466 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 EIF3IQ13347 325 aaKnown RBP12.4□□□□□ -0.42
PTCH1-215ENST00000547672 EBPQ15125 230 aaKnown RBP12.4□□□□□ -0.42
PTCH1-215ENST00000547672 CTU2Q2VPK5 515 aaKnown RBP12.4□□□□□ -0.42
PTCH1-215ENST00000547672 SLC25A30Q5SVS4 291 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 ZNF385CQ66K41 422 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-215ENST00000547672 SLC27A4Q6P1M0 643 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 CPEB2Q7Z5Q1 589 aaKnown RBP12.4□□□□□ -0.42
PTCH1-215ENST00000547672 HMGN2P46Q86SG4 172 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 LAPTM4BQ86VI4 370 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 COMTD1Q86VU5 262 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 MISPQ8IVT2 679 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 PRSS58Q8IYP2 241 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 BMPERQ8N8U9 685 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 ZNF540Q8NDQ6 660 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 NUBPLQ8TB37 319 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 TMEM239Q8WW34 195 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 FCGR1BQ92637 280 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 CTRCQ99895 268 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 CRB3Q9BUF7 120 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 SEMA4CQ9C0C4 833 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 WWTR1Q9GZV5 400 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 DUSP21Q9H596 190 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 SLC22A11Q9NSA0 550 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 FBXO34Q9NWN3 711 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 KCNE5Q9UJ90 142 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 PCDHGA1Q9Y5H4 931 aa12.4□□□□□ -0.42
PTCH1-215ENST00000547672 ZDBF2Q9HCK1 2354 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 RGS10O43665 173 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 ZFAND5O76080 213 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 UTS2O95399 124 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 IGKV1D-16P01601 117 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 LINGO3P0C6S8 592 aa12.39□□□□□ -0.43
PTCH1-215ENST00000547672 TMED10P49755 219 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms