RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 ATP6V1C1P21283 382 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 SLC1A6P48664 564 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 TPD52P55327 224 aaPredicted RBP16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 TP53BP2Q13625 1128 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 MPP2Q14168 576 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 FGFBP1Q14512 234 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 PDCD2Q16342 344 aaPredicted RBP16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 SPDYE7PQ495Y7 208 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 CCNJQ5T5M9 372 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 MTERF4Q7Z6M4 381 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 LRRC34Q8IZ02 419 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 LINC01560Q8TB33 94 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 NUDT8Q8WV74 236 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 FIG4Q92562 907 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 STARD4Q96DR4 205 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 OTUB1Q96FW1 271 aaPredicted RBP16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 DACH2Q96NX9 599 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 C20orf27Q9GZN8 174 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 CENPHQ9H3R5 247 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 AKTIPQ9H8T0 292 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 RNF122Q9H9V4 155 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 HIVEP1P15822 2718 aa16.79■□□□□ 0.28
CHMP1A-203ENST00000547614 ESPNB1AK53 854 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 CFLARO15519 480 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 GMFGO60234 142 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 CD1EP15812 388 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 KIR2DL2P43627 348 aaPredicted RBP16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 ZNF41P51814 821 aaPredicted RBP16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 HBA1P69905 142 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 PON3Q15166 354 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 GGNQ86UU5 652 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 CDC20BQ86Y33 519 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 WDR75Q8IWA0 830 aaKnown RBP16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 GATSQ8NAP1 163 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 ZNF527Q8NB42 609 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 OR8J2Q8NGG1 315 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 FNDC9Q8TBE3 224 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 NRGNQ92686 78 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 SORT1Q99523 831 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 KCNK9Q9NPC2 374 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 MED17Q9NVC6 651 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 PAQR5Q9NXK6 330 aaPredicted RBP16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 ABCA4P78363 2273 aa16.78■□□□□ 0.28
CHMP1A-203ENST00000547614 FCGR2AP12318 317 aa16.77■□□□□ 0.28
CHMP1A-203ENST00000547614 PSMA4P25789 261 aaKnown RBP16.77■□□□□ 0.28
CHMP1A-203ENST00000547614 RAC1P63000 192 aa16.77■□□□□ 0.28
CHMP1A-203ENST00000547614 STX3Q13277 289 aa16.77■□□□□ 0.28
CHMP1A-203ENST00000547614 CD226Q15762 336 aa16.77■□□□□ 0.28
CHMP1A-203ENST00000547614 SGCBQ16585 318 aa16.77■□□□□ 0.28
CHMP1A-203ENST00000547614 PGS1Q32NB8 556 aa16.77■□□□□ 0.28
CHMP1A-203ENST00000547614 PLPPR5Q32ZL2 321 aa16.77■□□□□ 0.28
CHMP1A-203ENST00000547614 KLHL26Q53HC5 615 aa16.77■□□□□ 0.28
CHMP1A-203ENST00000547614 DCST2Q5T1A1 773 aa16.77■□□□□ 0.28
CHMP1A-203ENST00000547614 CNEP1R1Q8N9A8 125 aa16.77■□□□□ 0.28
CHMP1A-203ENST00000547614 B4GALNT2Q8NHY0 566 aa16.77■□□□□ 0.28
CHMP1A-203ENST00000547614 SMPDL3BQ92485 455 aa16.77■□□□□ 0.28
CHMP1A-203ENST00000547614 NDRG3Q9UGV2 375 aa16.77■□□□□ 0.28
CHMP1A-203ENST00000547614 ST6GALNAC2Q9UJ37 374 aa16.77■□□□□ 0.28
CHMP1A-203ENST00000547614 DUXAA6NLW8 204 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 SHISA8B8ZZ34 492 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 H3BNH8 94 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 RNASET2O00584 256 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 ADAMDEC1O15204 470 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 SMNDC1O75940 238 aaKnown RBP eCLIP16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 BGNP21810 368 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 EIF1P41567 113 aaKnown RBP16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 ART1P52961 327 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 IST1P53990 364 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 ATP12AP54707 1039 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 GUSBP1Q15486 140 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 OR4F3Q6IEY1 312 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 VWA1Q6PCB0 445 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 BTLAQ7Z6A9 289 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 PHOSPHO1Q8TCT1 267 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 SH3YL1Q96HL8 342 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 ZNF845Q96IR2 970 aaPredicted RBP16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 PPP1R36Q96LQ0 422 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 OR7D2Q96RA2 312 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 DPY30Q9C005 99 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 PCDHGB4Q9UN71 923 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 KCNE3Q9Y6H6 103 aa16.76■□□□□ 0.27
CHMP1A-203ENST00000547614 SH3D21A4FU49 640 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 NPIPB9F8W1W9 429 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 EIF1AYO14602 144 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 CGAP01215 116 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 LINGO3P0C6S8 592 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 CD8BP10966 210 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 ME2P23368 584 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 CD79BP40259 229 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 EIF1AXP47813 144 aaKnown RBP16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 SUMO3P55854 103 aaPredicted RBP16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 FBXW10Q5XX13 1052 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 ESPNLQ6ZVH7 1005 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 FAM214BQ7L5A3 538 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 C6orf120Q7Z4R8 191 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 VPS37AQ8NEZ2 397 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 OR5AK3PQ8NH89 298 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 TESCQ96BS2 214 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 ADGRG7Q96K78 797 aa16.75■□□□□ 0.27
CHMP1A-203ENST00000547614 RNF145Q96MT1 663 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms