RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 FAM214BQ7L5A3 538 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 ZNF550Q7Z398 422 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 KRTAP1-3Q8IUG1 177 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 GTPBP8Q8N3Z3 284 aaPredicted RBP11.97□□□□□ -0.49
CPSF6-204ENST00000547486 RIBC1Q8N443 379 aaPredicted RBP11.97□□□□□ -0.49
CPSF6-204ENST00000547486 COX18Q8N8Q8 333 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 ACTRT2Q8TDY3 377 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 AENQ8WTP8 325 aaKnown RBP11.97□□□□□ -0.49
CPSF6-204ENST00000547486 JADE3Q92613 823 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 ZNF524Q96C55 264 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 COQ8BQ96D53 544 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 MARK4Q96L34 752 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 RNF145Q96MT1 663 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 SLC39A3Q9BRY0 314 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 BTBD2Q9BX70 525 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 ROPN1BQ9BZX4 212 aaPredicted RBP11.97□□□□□ -0.49
CPSF6-204ENST00000547486 PIGUQ9H490 435 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 CXorf36Q9H7Y0 433 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 ROPN1Q9HAT0 212 aaPredicted RBP11.97□□□□□ -0.49
CPSF6-204ENST00000547486 CLEC4AQ9UMR7 237 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 SNX8Q9Y5X2 465 aa11.97□□□□□ -0.49
CPSF6-204ENST00000547486 A0A0J9YW62 118 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 A0A1W2PQD3 144 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 C7orf72A4D263 438 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 TMEM114B3SHH9 223 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 C16orf97H3BN30 126 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 ADAMDEC1O15204 470 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 TYROBPO43914 113 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 EFNA2O43921 213 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 CXCL13O43927 109 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 SKAP2O75563 359 aaPredicted RBP11.96□□□□□ -0.49
CPSF6-204ENST00000547486 LINGO3P0C6S8 592 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 ZNF17P17021 662 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 LCN1P31025 176 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 HPCAL1P37235 193 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 ETV4P43268 484 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 KCNJ5P48544 419 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 SERPINB4P48594 390 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 CCT3P49368 545 aaKnown RBP11.96□□□□□ -0.49
CPSF6-204ENST00000547486 PRIM2P49643 509 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 RPS3AP61247 264 aaKnown RBP11.96□□□□□ -0.49
CPSF6-204ENST00000547486 RAC1P63000 192 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 POU6F2P78424 691 aaPredicted RBP11.96□□□□□ -0.49
CPSF6-204ENST00000547486 IFFO1Q0D2I5 559 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 CXorf67Q86X51 503 aaPredicted RBP11.96□□□□□ -0.49
CPSF6-204ENST00000547486 WDR75Q8IWA0 830 aaKnown RBP11.96□□□□□ -0.49
CPSF6-204ENST00000547486 RIMKLAQ8IXN7 391 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 OR10D3Q8NH80 312 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 PSMA8Q8TAA3 256 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 OR5P2Q8WZ92 322 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 STACQ99469 402 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 TMEM185BQ9H7F4 350 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 ZNF395Q9H8N7 513 aaPredicted RBP11.96□□□□□ -0.49
CPSF6-204ENST00000547486 PLSCR4Q9NRQ2 329 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 DUSP22Q9NRW4 184 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 GPATCH2Q9NW75 528 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 GIN1Q9NXP7 522 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 PROCRQ9UNN8 238 aa11.96□□□□□ -0.49
CPSF6-204ENST00000547486 EIF3LQ9Y262 564 aaKnown RBP11.96□□□□□ -0.49
CPSF6-204ENST00000547486 NPIPA5A0A0B4J1W7 369 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 NPIPA7E9PJI5 369 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 SCDO00767 359 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 TNFSF11O14788 317 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 C6orf47O95873 294 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 NPIPA8P0DM63 369 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 HPGDP15428 266 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 CRYGSP22914 178 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 LOXP28300 417 aaPredicted RBP11.95□□□□□ -0.5
CPSF6-204ENST00000547486 MAPK1P28482 360 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 SHC1P29353 583 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 SERPINB5P36952 375 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 ZNF117Q03924 483 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 FGFBP1Q14512 234 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 EXOC3L2Q2M3D2 409 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 ATP6AP1LQ52LC2 224 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 KLHL26Q53HC5 615 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.95□□□□□ -0.5
CPSF6-204ENST00000547486 PPP4R4Q6NUP7 873 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 CDC73Q6P1J9 531 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 CBLN3Q6UW01 205 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 HOMEZQ8IX15 550 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 FNDC5Q8NAU1 212 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 OR2V1Q8NHB1 315 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 B4GALNT2Q8NHY0 566 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 ZBTB8AQ96BR9 441 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 PIK3IP1Q96FE7 263 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 CHMP6Q96FZ7 201 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 ZC3HAV1LQ96H79 300 aaKnown RBP11.95□□□□□ -0.5
CPSF6-204ENST00000547486 POM121Q96HA1 1249 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 HS3ST6Q96QI5 342 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 MED18Q9BUE0 208 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 ACTRT3Q9BYD9 372 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 PRRG4Q9BZD6 226 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 KLHL4Q9C0H6 718 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 NEUROD4Q9HD90 331 aa11.95□□□□□ -0.5
CPSF6-204ENST00000547486 ACANP16112 2415 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 ITM2AO43736 263 aa11.94□□□□□ -0.5
CPSF6-204ENST00000547486 SS18L1O75177 396 aaPredicted RBP11.94□□□□□ -0.5
CPSF6-204ENST00000547486 LYPLA1O75608 230 aaPredicted RBP11.94□□□□□ -0.5
CPSF6-204ENST00000547486 THBDP07204 575 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms