RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 ZNF350Q9GZX5 532 aa13.84□□□□□ -0.19
SSH1-204ENST00000546697 ACBD3Q9H3P7 528 aa13.84□□□□□ -0.19
SSH1-204ENST00000546697 POLE3Q9NRF9 147 aa13.84□□□□□ -0.19
SSH1-204ENST00000546697 ICAM5Q9UMF0 924 aa13.84□□□□□ -0.19
SSH1-204ENST00000546697 ZNF337Q9Y3M9 751 aa13.84□□□□□ -0.19
SSH1-204ENST00000546697 L3MBTL1Q9Y468 752 aa13.84□□□□□ -0.19
SSH1-204ENST00000546697 ZNF175Q9Y473 711 aa13.84□□□□□ -0.19
SSH1-204ENST00000546697 KCNE3Q9Y6H6 103 aa13.84□□□□□ -0.19
SSH1-204ENST00000546697 FAM221AA4D161 298 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 FAM90A27PA6NNH2 459 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 CLCA1A8K7I4 914 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 SCDO00767 359 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 TGDSO95455 350 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 PGRP06401 933 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 LINGO3P0C6S8 592 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 NID1P14543 1247 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 IDO1P14902 403 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 HK1P19367 917 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 ADH6P28332 368 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 STARP49675 285 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 EEFSECP57772 596 aaKnown RBP13.83□□□□□ -0.2
SSH1-204ENST00000546697 GUSBP1Q15486 140 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 CD226Q15762 336 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 ZNF141Q15928 474 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 GSTA3Q16772 222 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 PGS1Q32NB8 556 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 PLPPR5Q32ZL2 321 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 ARHGAP11BQ3KRB8 267 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 FAM174BQ3ZCQ3 159 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 TTMPQ5BVD1 217 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.83□□□□□ -0.2
SSH1-204ENST00000546697 CCNJQ5T5M9 372 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 MEX3BQ6ZN04 569 aaKnown RBP13.83□□□□□ -0.2
SSH1-204ENST00000546697 MSANTD1Q6ZTZ1 278 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 SZRD1Q7Z422 152 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 ZNF527Q8NB42 609 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 TOR1AIP2Q8NFQ8 470 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 FBXO30Q8TB52 745 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 ARSGQ96EG1 525 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 ADGRG7Q96K78 797 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 TRIB1Q96RU8 372 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 YIPF4Q9BSR8 244 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 WDR55Q9H6Y2 383 aaPredicted RBP13.83□□□□□ -0.2
SSH1-204ENST00000546697 ZIM2Q9NZV7 527 aa13.83□□□□□ -0.2
SSH1-204ENST00000546697 RNF103-CHMP3A0A140T963 221 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 H0Y3Z8 333 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 ADAMDEC1O15204 470 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 NTN1O95631 604 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 CAPN3P20807 821 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 UFM1P61960 85 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 SORDQ00796 357 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 SPDYE7PQ495Y7 208 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 SLC25A53Q5H9E4 307 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 EPGNQ6UW88 154 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 ARSKQ6UWY0 536 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 HDXQ7Z353 690 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 GGNQ86UU5 652 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 OR5AK3PQ8NH89 298 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 MGARPQ8TDB4 240 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 JADE3Q92613 823 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 PMM1Q92871 262 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 RNASE6Q93091 150 aaKnown RBP13.82□□□□□ -0.2
SSH1-204ENST00000546697 MCCC2Q9HCC0 563 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 MED17Q9NVC6 651 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 TMEM45AQ9NWC5 275 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 PCDHGB4Q9UN71 923 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 DTNAQ9Y4J8 743 aa13.82□□□□□ -0.2
SSH1-204ENST00000546697 CREBBPQ92793 2442 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 MED12LQ86YW9 2145 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 HMGB1P1B2RPK0 211 aaPredicted RBP13.81□□□□□ -0.2
SSH1-204ENST00000546697 CFLARO15519 480 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 EIF4E2O60573 245 aaKnown RBP13.81□□□□□ -0.2
SSH1-204ENST00000546697 TNFSF13O75888 250 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 IL6P05231 212 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 ZCCHC18P0CG32 403 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 ATP6V1C1P21283 382 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 MATN1P21941 496 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 ELK4P28324 431 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 S100A3P33764 101 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 EIF1P41567 113 aaKnown RBP13.81□□□□□ -0.2
SSH1-204ENST00000546697 RFX3P48380 749 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 SUCLG1P53597 346 aaKnown RBP13.81□□□□□ -0.2
SSH1-204ENST00000546697 RAC1P63000 192 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 IRX1P78414 480 aaPredicted RBP13.81□□□□□ -0.2
SSH1-204ENST00000546697 ZNF117Q03924 483 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 STX5Q13190 355 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 CTU2Q2VPK5 515 aaKnown RBP13.81□□□□□ -0.2
SSH1-204ENST00000546697 SLC9B1Q4ZJI4 515 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 RAET1LQ5VY80 246 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 OR2A2Q6IF42 318 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 GALNT10Q86SR1 603 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 MEIOBQ8N635 442 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 FAM71CQ8NEG0 241 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 OR5D16Q8NGK9 328 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 OR4A15Q8NGL6 344 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 B4GALNT2Q8NHY0 566 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 POC1BQ8TC44 478 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 ZBTB9Q96C00 473 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 OTUB1Q96FW1 271 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms