RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 OR4K17Q8NGC6 315 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 TREX2Q9BQ50 279 aaPredicted RBP18.64■□□□□ 0.57
HMGA2-211ENST00000545998 QRSL1Q9H0R6 528 aaKnown RBP18.64■□□□□ 0.57
HMGA2-211ENST00000545998 TMEM38AQ9H6F2 299 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 EFCAB1Q9HAE3 211 aa18.64■□□□□ 0.57
HMGA2-211ENST00000545998 SUCOQ9UBS9 1254 aaKnown RBP18.64■□□□□ 0.57
HMGA2-211ENST00000545998 A0A1B0GVC2 190 aa18.63■□□□□ 0.57
HMGA2-211ENST00000545998 H3BNH8 94 aa18.63■□□□□ 0.57
HMGA2-211ENST00000545998 TRAPPC6AO75865 159 aa18.63■□□□□ 0.57
HMGA2-211ENST00000545998 RPS4Y1P22090 263 aaKnown RBP18.63■□□□□ 0.57
HMGA2-211ENST00000545998 RABL3Q5HYI8 236 aa18.63■□□□□ 0.57
HMGA2-211ENST00000545998 PRAMEF8Q5VWM4 474 aa18.63■□□□□ 0.57
HMGA2-211ENST00000545998 PRAMEF7Q5VXH5 474 aa18.63■□□□□ 0.57
HMGA2-211ENST00000545998 TRILQ7L0X0 811 aa18.63■□□□□ 0.57
HMGA2-211ENST00000545998 FITM2Q8N6M3 262 aa18.63■□□□□ 0.57
HMGA2-211ENST00000545998 PHOSPHO1Q8TCT1 267 aa18.63■□□□□ 0.57
HMGA2-211ENST00000545998 SH3GL1Q99961 368 aa18.63■□□□□ 0.57
HMGA2-211ENST00000545998 BCL2L10Q9HD36 194 aa18.63■□□□□ 0.57
HMGA2-211ENST00000545998 A0A0G2JPF8 293 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 SERINC4A6NH21 518 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 AGAP5A6NIR3 686 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 HNRNPCL2B2RXH8 293 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 HNRNPCL3B7ZW38 293 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 PYCARD-AS1I3L0S3 204 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 SUSD5O60279 629 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 HCN1O60741 890 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 HNRNPCL1O60812 293 aaKnown RBP18.62■□□□□ 0.57
HMGA2-211ENST00000545998 HNRNPCL4P0DMR1 293 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 GNLYP22749 145 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 SLC6A2P23975 617 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 SRD5A2P31213 254 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 ADH7P40394 386 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 TOMM20Q15388 145 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 RPS26P11Q5JNZ5 115 aaPredicted RBP18.62■□□□□ 0.57
HMGA2-211ENST00000545998 NET1Q7Z628 596 aaPredicted RBP18.62■□□□□ 0.57
HMGA2-211ENST00000545998 FGD2Q7Z6J4 655 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 HMGN2P46Q86SG4 172 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 PTOV1Q86YD1 416 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 METTL25Q8N6Q8 603 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 FAM83FQ8NEG4 500 aaPredicted RBP18.62■□□□□ 0.57
HMGA2-211ENST00000545998 GPATCH1Q9BRR8 931 aaKnown RBP18.62■□□□□ 0.57
HMGA2-211ENST00000545998 OR2B2Q9GZK3 357 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 SLC6A15Q9H2J7 730 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 MRPS18CQ9Y3D5 142 aaKnown RBP18.62■□□□□ 0.57
HMGA2-211ENST00000545998 L3MBTL1Q9Y468 752 aa18.62■□□□□ 0.57
HMGA2-211ENST00000545998 TRGV5A0A0B4J1U4 118 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 A0A1B0GTH9 108 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 OIP5O43482 229 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 ENDOUP21128 410 aaKnown RBP18.61■□□□□ 0.57
HMGA2-211ENST00000545998 MSX1P28360 303 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 UQCRFS1P47985 274 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 GZMMP51124 257 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 DSCR4P56555 118 aaPredicted RBP18.61■□□□□ 0.57
HMGA2-211ENST00000545998 CDK6Q00534 326 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 ZNF117Q03924 483 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 FGFBP1Q14512 234 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 ZNF630Q2M218 657 aaPredicted RBP18.61■□□□□ 0.57
HMGA2-211ENST00000545998 EIPR1Q53HC9 387 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 C8orf82Q6P1X6 216 aaPredicted RBP18.61■□□□□ 0.57
HMGA2-211ENST00000545998 ARHGAP11AQ6P4F7 1023 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 HACD2Q6Y1H2 254 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 SERPINA11Q86U17 422 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 SPPL2CQ8IUH8 684 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 OR10A6Q8NH74 314 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 NFKBIDQ8NI38 313 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 DTNBP1Q96EV8 351 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 SH3YL1Q96HL8 342 aaPredicted RBP18.61■□□□□ 0.57
HMGA2-211ENST00000545998 LDAHQ9H6V9 325 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 PTGES2Q9H7Z7 377 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 ARL8BQ9NVJ2 186 aa18.61■□□□□ 0.57
HMGA2-211ENST00000545998 C5orf58C9J3I9 102 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 J3QKU1 62 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 ZNHIT1O43257 154 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 ZIC3O60481 467 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 PGM3O95394 542 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 DPP4P27487 766 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 NUDT2P50583 147 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 ART3Q13508 389 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 SCARB2Q14108 478 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 ELOAQ14241 798 aaKnown RBP18.6■□□□□ 0.57
HMGA2-211ENST00000545998 GANABQ14697 944 aaKnown RBP18.6■□□□□ 0.57
HMGA2-211ENST00000545998 CYP51A1Q16850 503 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 REEP3Q6NUK4 255 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 CBLN3Q6UW01 205 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 EIF3MQ7L2H7 374 aaKnown RBP18.6■□□□□ 0.57
HMGA2-211ENST00000545998 YRDCQ86U90 279 aaKnown RBP18.6■□□□□ 0.57
HMGA2-211ENST00000545998 B4GALNT2Q8NHY0 566 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 BBS10Q8TAM1 723 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 NEIL3Q8TAT5 605 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 C1GALT1C1Q96EU7 318 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 TAS2R10Q9NYW0 307 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 DKKL1Q9UK85 242 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 CARD8Q9Y2G2 431 aa18.6■□□□□ 0.57
HMGA2-211ENST00000545998 GTPBP1O00178 669 aaKnown RBP18.59■□□□□ 0.57
HMGA2-211ENST00000545998 AQP7O14520 342 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 ZNF264O43296 627 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 HCRTR2O43614 444 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 GMFGO60234 142 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 DBIP07108 87 aaKnown RBP18.59■□□□□ 0.57
HMGA2-211ENST00000545998 UBL4AP11441 157 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms