RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 OR7G3Q8NG95 312 aa2.9□□□□□ -1.95
SNHG1-224ENST00000545688 HAS2Q92819 552 aa2.9□□□□□ -1.95
SNHG1-224ENST00000545688 MRPL38Q96DV4 380 aaKnown RBP2.9□□□□□ -1.95
SNHG1-224ENST00000545688 TGS1Q96RS0 853 aaKnown RBP2.9□□□□□ -1.95
SNHG1-224ENST00000545688 CITED2Q99967 270 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-224ENST00000545688 ELOVL4Q9GZR5 314 aa2.9□□□□□ -1.95
SNHG1-224ENST00000545688 TRPV6Q9H1D0 765 aa2.9□□□□□ -1.95
SNHG1-224ENST00000545688 SLC26A1Q9H2B4 701 aa2.9□□□□□ -1.95
SNHG1-224ENST00000545688 RPAP3Q9H6T3 665 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-224ENST00000545688 DCTPP1Q9H773 170 aa2.9□□□□□ -1.95
SNHG1-224ENST00000545688 TMEM206Q9H813 350 aa2.9□□□□□ -1.95
SNHG1-224ENST00000545688 HMG20BQ9P0W2 317 aa2.9□□□□□ -1.95
SNHG1-224ENST00000545688 TUBGCP4Q9UGJ1 667 aa2.9□□□□□ -1.95
SNHG1-224ENST00000545688 SLC2A6Q9UGQ3 507 aa2.9□□□□□ -1.95
SNHG1-224ENST00000545688 DIMT1Q9UNQ2 313 aaKnown RBP2.9□□□□□ -1.95
SNHG1-224ENST00000545688 LOC400499M0QZD8 3231 aa2.9□□□□□ -1.95
SNHG1-224ENST00000545688 CYB561D2O14569 222 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 TTI1O43156 1089 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 HSPA4LO95757 839 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 GAS8O95995 478 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 IGHV3-23P01764 117 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 CXCL10P02778 98 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 PGK2P07205 417 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 IQCF3P0C7M6 154 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 SAA4P35542 130 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 OR3A4PP47883 348 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 RPS4XP62701 263 aaKnown RBP2.89□□□□□ -1.95
SNHG1-224ENST00000545688 CDKL1Q00532 357 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 ZNF85Q03923 595 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 SIGLEC14Q08ET2 396 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 KRT31Q15323 416 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 IL17AQ16552 155 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 GLYR1Q49A26 553 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-224ENST00000545688 MPPE1Q53F39 396 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 NHSL2Q5HYW2 709 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 TCHHL1Q5QJ38 904 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-224ENST00000545688 CXCL17Q6UXB2 119 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 FAM47EQ6ZV65 393 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 TMEM126BQ8IUX1 230 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 ERI1Q8IV48 349 aaKnown RBP2.89□□□□□ -1.95
SNHG1-224ENST00000545688 KMT2EQ8IZD2 1858 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 RFESDQ8TAC1 157 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 MRPL53Q96EL3 112 aaKnown RBP2.89□□□□□ -1.95
SNHG1-224ENST00000545688 ALDH8A1Q9H2A2 487 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-224ENST00000545688 KCNMB3Q9NPA1 279 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 NRN1Q9NPD7 142 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 KLK12Q9UKR0 248 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 ITM2BQ9Y287 266 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 Q9Y3F1 56 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 MYH2Q9UKX2 1941 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 ATAD5Q96QE3 1844 aa2.89□□□□□ -1.95
SNHG1-224ENST00000545688 ASH1LQ9NR48 2969 aaKnown RBP2.88□□□□□ -1.95
SNHG1-224ENST00000545688 SETXQ7Z333 2677 aaKnown RBP2.88□□□□□ -1.95
SNHG1-224ENST00000545688 BPTFQ12830 3046 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 FRYQ5TBA9 3013 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 MAST4O15021 2626 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 IGKV6-21A0A0C4DH24 114 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 TRIM49D1C9J1S8 452 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 C5orf67F2Z3F1 127 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 TYROBPO43914 113 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 LCMT2O60294 686 aaKnown RBP2.88□□□□□ -1.95
SNHG1-224ENST00000545688 TBCAO75347 108 aaKnown RBP2.88□□□□□ -1.95
SNHG1-224ENST00000545688 CRCPO75575 148 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 PDE5AO76074 875 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 ALOX5P09917 674 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 IGHV1-2P23083 117 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 COPB2P35606 906 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 HAND2P61296 217 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 TIMM10P62072 90 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 DEFB103AP81534 67 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 BEX3Q00994 111 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 RPS6KA1Q15418 735 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 KYAT1Q16773 422 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 TCEAL5Q5H9L2 206 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 CCDC158Q5M9N0 1113 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 RTL6Q6ICC9 239 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 CD164L2Q6UWJ8 174 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 ARMCX2Q7L311 632 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 HOOK3Q86VS8 718 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 CCDC83Q8IWF9 413 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 FAM133AQ8N9E0 248 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 RDH11Q8TC12 318 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 GLYATL1Q969I3 302 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 FAM46BQ96A09 425 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 ERP27Q96DN0 273 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 SLC25A38Q96DW6 304 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 HCAR1Q9BXC0 346 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 DNAJC17Q9NVM6 304 aaKnown RBP2.88□□□□□ -1.95
SNHG1-224ENST00000545688 AATFQ9NY61 560 aaKnown RBP eCLIP2.88□□□□□ -1.951e-323■■■□□ 16.4
SNHG1-224ENST00000545688 DNAJB9Q9UBS3 223 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 CTNNA3Q9UI47 895 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 SLC9A8Q9Y2E8 581 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 RPH3AQ9Y2J0 694 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-224ENST00000545688 FANCIQ9NVI1 1328 aa2.88□□□□□ -1.95
SNHG1-224ENST00000545688 SCN10AQ9Y5Y9 1956 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 SH2D1BO14796 132 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 FLOT1O75955 427 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 SCG2P13521 617 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 UGT1A6P19224 532 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 FUT3P21217 361 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms