RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TMEM121BQ9BXQ6 578 aaPredicted RBP12.03□□□□□ -0.48
CHD4-211ENST00000544484 GORASP2Q9H8Y8 452 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 COPZ2Q9P299 210 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 REV1Q9UBZ9 1251 aa12.03□□□□□ -0.48
CHD4-211ENST00000544484 FTMTQ8N4E7 242 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 ABHD11Q8NFV4 315 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 OR5W2Q8NH69 310 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 CHFRQ96EP1 664 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 THSD1Q9NS62 852 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 KCNN3Q9UGI6 736 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 EEF1E1-BLOC1S5C9J1V9 151 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 BOLA2-SMG1P6H3BVE0 249 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 H7C417 338 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 SULT2B1O00204 365 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 PHYHO14832 338 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 BCAS1O75363 584 aaPredicted RBP12.02□□□□□ -0.48
CHD4-211ENST00000544484 PNMTP11086 282 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 CPMP14384 443 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 ZNF28P17035 718 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 GK3PQ14409 553 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 LEXMQ3ZCV2 418 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 UBE2UQ5VVX9 321 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 Q6ZPB1 254 aaPredicted RBP12.02□□□□□ -0.48
CHD4-211ENST00000544484 OR51B6Q9H340 312 aa12.02□□□□□ -0.48
CHD4-211ENST00000544484 INTS6Q9UL03 887 aaKnown RBP12.02□□□□□ -0.48
CHD4-211ENST00000544484 KIAA0895LQ68EN5 471 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 PLAG1Q6DJT9 500 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 DCDC5Q6ZRR9 648 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 TRUB1Q8WWH5 349 aaKnown RBP12.02□□□□□ -0.49
CHD4-211ENST00000544484 METTL2AQ96IZ6 378 aaKnown RBP12.02□□□□□ -0.49
CHD4-211ENST00000544484 LRRTM2O43300 516 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 AMY2AP04746 511 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 CFL1P23528 166 aaKnown RBP12.02□□□□□ -0.49
CHD4-211ENST00000544484 ZP2Q05996 745 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 NR0B2Q15466 257 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 CBLL1Q75N03 491 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 TRIM46Q7Z4K8 759 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 GPR149Q86SP6 731 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 PHC2Q8IXK0 858 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 RBM12BQ8IXT5 1001 aaKnown RBP12.02□□□□□ -0.49
CHD4-211ENST00000544484 SPPL3Q8TCT6 385 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 NT5C3BQ969T7 300 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 TM7SF3Q9NS93 570 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 TMEM45AQ9NWC5 275 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 TCRBV3S1A0A5B6 114 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 CNOT4O95628 575 aaKnown RBP12.02□□□□□ -0.49
CHD4-211ENST00000544484 GPR75O95800 540 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 SSTR4P31391 388 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 KEAP1Q14145 624 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 NKPD1Q17RQ9 610 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 CFAP77Q6ZQR2 320 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 TFAP2CQ92754 450 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 OR52D1Q9H346 318 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 PRKRAO75569 313 aaKnown RBP12.02□□□□□ -0.49
CHD4-211ENST00000544484 RP2O75695 350 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 EEF1A2Q05639 463 aaKnown RBP12.02□□□□□ -0.49
CHD4-211ENST00000544484 AIMP2Q13155 320 aaKnown RBP12.02□□□□□ -0.49
CHD4-211ENST00000544484 KLHL15Q96M94 604 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 ACAD8Q9UKU7 415 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 CBLCQ9ULV8 474 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 CARD8Q9Y2G2 431 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 SPEF1Q9Y4P9 236 aa12.02□□□□□ -0.49
CHD4-211ENST00000544484 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.01□□□□□ -0.49
CHD4-211ENST00000544484 A6NIN4 97 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 H3BMQ9 156 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 HTR3BO95264 441 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 CD79AP11912 226 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 C21orf33P30042 268 aaPredicted RBP12.01□□□□□ -0.49
CHD4-211ENST00000544484 THBS2P35442 1172 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 RGS19P49795 217 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 CHRNEQ04844 493 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 LSAMPQ13449 338 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 LIX1LQ8IVB5 337 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 SERPINA12Q8IW75 414 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 EID2Q8N6I1 236 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 C16orf58Q96GQ5 468 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 COG8Q96MW5 612 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 TEX10Q9NXF1 929 aaPredicted RBP12.01□□□□□ -0.49
CHD4-211ENST00000544484 MAB21L2Q9Y586 359 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 TRBV11-1A0A0K0K1C0 115 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 LINC01553A4QN01 128 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 CXCR4P61073 352 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 MGAT3Q09327 533 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 SMN1Q16637 294 aaKnown RBP12.01□□□□□ -0.49
CHD4-211ENST00000544484 ELMOD2Q8IZ81 293 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 CD300LFQ8TDQ1 290 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 FKBP10Q96AY3 582 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 BIRC8Q96P09 236 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 PCDHGA6Q9Y5G7 932 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 GRXCR2A6NFK2 248 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 PBX2P40425 430 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 SLC6A8P48029 635 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 SPARTQ8N0X7 666 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 METTL4Q8N3J2 472 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 STOML3Q8TAV4 291 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 ACOT11Q8WXI4 607 aaPredicted RBP12.01□□□□□ -0.49
CHD4-211ENST00000544484 TBC1D20Q96BZ9 403 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 ZC3H10Q96K80 434 aaKnown RBP12.01□□□□□ -0.49
CHD4-211ENST00000544484 POT1Q9NUX5 634 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 ZNF443Q9Y2A4 671 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms