RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 DGCR6Q14129 220 aa28■■■□□ 2.07
CCM2-219ENST00000544363 FGD3Q5JSP0 725 aa28■■■□□ 2.07
CCM2-219ENST00000544363 C16orf47Q6ZP98 133 aaPredicted RBP28■■■□□ 2.07
CCM2-219ENST00000544363 OR10G2Q8NGC3 310 aa28■■■□□ 2.07
CCM2-219ENST00000544363 SLC35B4Q969S0 331 aa28■■■□□ 2.07
CCM2-219ENST00000544363 NACC2Q96BF6 587 aa28■■■□□ 2.07
CCM2-219ENST00000544363 DEFB126Q9BYW3 111 aa28■■■□□ 2.07
CCM2-219ENST00000544363 MMP25Q9NPA2 562 aa28■■■□□ 2.07
CCM2-219ENST00000544363 TMEFF2Q9UIK5 374 aaPredicted RBP28■■■□□ 2.07
CCM2-219ENST00000544363 TMCC3Q9ULS5 477 aa28■■■□□ 2.07
CCM2-219ENST00000544363 NPFFR2Q9Y5X5 522 aa28■■■□□ 2.07
CCM2-219ENST00000544363 GVINP1Q7Z2Y8 2422 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 NSG1A0A0A6YYJ2 146 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 TRBV4-1A0A0J9YWV2 114 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 CDRT15L2A8MXV6 281 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 SCDO00767 359 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 DENRO43583 198 aaKnown RBP27.99■■■□□ 2.07
CCM2-219ENST00000544363 CCNB2O95067 398 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 SNAP29O95721 258 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 PRG2P13727 222 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 IFNA8P32881 189 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 ADH7P40394 386 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 FOXD4Q12950 439 aaPredicted RBP27.99■■■□□ 2.07
CCM2-219ENST00000544363 DCST1Q5T197 706 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 KDM4DQ6B0I6 523 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 FAHD1Q6P587 224 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 PLEKHM3Q6ZWE6 761 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 ZNF570Q96NI8 536 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 PSD2Q9BQI7 771 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 POLR2J2Q9GZM3 115 aaKnown RBP27.99■■■□□ 2.07
CCM2-219ENST00000544363 POLR2J3Q9H1A7 115 aaKnown RBP27.99■■■□□ 2.07
CCM2-219ENST00000544363 DLL3Q9NYJ7 618 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 SLC35A3Q9Y2D2 325 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 NTNG1Q9Y2I2 539 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 PTPRBP23467 1997 aa27.99■■■□□ 2.07
CCM2-219ENST00000544363 LOC101059948A0A1B0GTJ6 334 aa27.98■■■□□ 2.07
CCM2-219ENST00000544363 IQCJ-SCHIP1C9J366 451 aaPredicted RBP27.98■■■□□ 2.07
CCM2-219ENST00000544363 WWP2O00308 870 aa27.98■■■□□ 2.07
CCM2-219ENST00000544363 FMO6PO60774 539 aa27.98■■■□□ 2.07
CCM2-219ENST00000544363 ICOSLGO75144 302 aa27.98■■■□□ 2.07
CCM2-219ENST00000544363 MERTKQ12866 999 aa27.98■■■□□ 2.07
CCM2-219ENST00000544363 DESI1Q6ICB0 168 aa27.98■■■□□ 2.07
CCM2-219ENST00000544363 ATG16L2Q8NAA4 619 aa27.98■■■□□ 2.07
CCM2-219ENST00000544363 ADAMTS16Q8TE57 1224 aa27.98■■■□□ 2.07
CCM2-219ENST00000544363 FUZQ9BT04 418 aa27.98■■■□□ 2.07
CCM2-219ENST00000544363 ADI1Q9BV57 179 aa27.98■■■□□ 2.07
CCM2-219ENST00000544363 MAN2C1Q9NTJ4 1040 aa27.98■■■□□ 2.07
CCM2-219ENST00000544363 KIF17Q9P2E2 1029 aa27.98■■■□□ 2.07
CCM2-219ENST00000544363 MYOTQ9UBF9 498 aa27.98■■■□□ 2.07
CCM2-219ENST00000544363 TESQ9UGI8 421 aaKnown RBP27.98■■■□□ 2.07
CCM2-219ENST00000544363 OR6C70A6NIJ9 312 aa27.97■■■□□ 2.07
CCM2-219ENST00000544363 NADKO95544 446 aaPredicted RBP27.97■■■□□ 2.07
CCM2-219ENST00000544363 CSTAP01040 98 aa27.97■■■□□ 2.07
CCM2-219ENST00000544363 FNDC7Q5VTL7 733 aa27.97■■■□□ 2.07
CCM2-219ENST00000544363 TFAP2CQ92754 450 aa27.97■■■□□ 2.07
CCM2-219ENST00000544363 CDV3Q9UKY7 258 aaKnown RBP27.97■■■□□ 2.07
CCM2-219ENST00000544363 ORC6Q9Y5N6 252 aa27.97■■■□□ 2.07
CCM2-219ENST00000544363 ARRDC5A6NEK1 342 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 ZNF354AO60765 605 aaPredicted RBP27.96■■■□□ 2.07
CCM2-219ENST00000544363 UGT2B11O75310 529 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 PPM1BO75688 479 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 CYP7B1O75881 506 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 OR5F1O95221 314 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 NGFRP08138 427 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 ANXA8P13928 327 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 IGFBP5P24593 272 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 ST3GAL3Q11203 375 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 MED21Q13503 144 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 RFX4Q33E94 735 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 APOOLQ6UXV4 268 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 ZNF550Q7Z398 422 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 DHRSXQ8N5I4 330 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 SLC5A8Q8N695 610 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 SLC7A13Q8TCU3 470 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 FEVQ99581 238 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 ZNF160Q9HCG1 818 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 FAAHO00519 579 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 CELA2AP08217 269 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 UBTFL6P0CB48 400 aaPredicted RBP27.96■■■□□ 2.07
CCM2-219ENST00000544363 HTR2AP28223 471 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 RAD23AP54725 363 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 ZIK1Q3SY52 487 aaPredicted RBP27.96■■■□□ 2.07
CCM2-219ENST00000544363 IGF2-ASQ6U949 168 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 NKD1Q969G9 470 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 ZNF559Q9BR84 538 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 ANKRD19PQ9H560 264 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 ZBTB20Q9HC78 741 aaPredicted RBP27.96■■■□□ 2.07
CCM2-219ENST00000544363 PCDHGA6Q9Y5G7 932 aa27.96■■■□□ 2.07
CCM2-219ENST00000544363 NAGAP17050 411 aa27.95■■■□□ 2.06
CCM2-219ENST00000544363 ACAA2P42765 397 aaKnown RBP27.95■■■□□ 2.06
CCM2-219ENST00000544363 EPS8Q12929 822 aa27.95■■■□□ 2.06
CCM2-219ENST00000544363 EFR3AQ14156 821 aa27.95■■■□□ 2.06
CCM2-219ENST00000544363 TRAM2Q15035 370 aa27.95■■■□□ 2.06
CCM2-219ENST00000544363 SEC23BQ15437 767 aa27.95■■■□□ 2.06
CCM2-219ENST00000544363 OR9Q2Q8NGE9 314 aa27.95■■■□□ 2.06
CCM2-219ENST00000544363 SLC41A3Q96GZ6 507 aa27.95■■■□□ 2.06
CCM2-219ENST00000544363 TOR3AQ9H497 397 aa27.95■■■□□ 2.06
CCM2-219ENST00000544363 ASCL3Q9NQ33 180 aa27.95■■■□□ 2.06
CCM2-219ENST00000544363 DMXL1Q9Y485 3027 aa27.95■■■□□ 2.06
CCM2-219ENST00000544363 CNOT1A5YKK6 2376 aaKnown RBP27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms