RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 GGHQ92820 318 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 SLC38A4Q969I6 547 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 MPP4Q96JB8 637 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 SAP130Q9H0E3 1048 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 WARS2Q9UGM6 360 aaKnown RBP12.62□□□□□ -0.39
HCFC2-202ENST00000544223 SATB2Q9UPW6 733 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 IGKV3D-11A0A0A0MRZ8 115 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 MASP2O00187 686 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 SLC2A10O95528 541 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 GINS1Q14691 196 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 TRAM2Q15035 370 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 CD226Q15762 336 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 ZBED5Q49AG3 693 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 CBLN3Q6UW01 205 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 B3GLCTQ6Y288 498 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 RRM2BQ7LG56 351 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 B3GNT7Q8NFL0 401 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 FAR1Q8WVX9 515 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 C12orf43Q96C57 262 aaKnown RBP12.62□□□□□ -0.39
HCFC2-202ENST00000544223 CHRNA10Q9GZZ6 450 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 CACYBPQ9HB71 228 aaKnown RBP12.62□□□□□ -0.39
HCFC2-202ENST00000544223 SLC24A3Q9HC58 644 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 Q9N2J8 555 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 SEMA5BQ9P283 1151 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 RSL24D1Q9UHA3 163 aaKnown RBP12.62□□□□□ -0.39
HCFC2-202ENST00000544223 MGAT4BQ9UQ53 548 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 ZNF292O60281 2723 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 TLX2O43763 284 aaPredicted RBP12.61□□□□□ -0.39
HCFC2-202ENST00000544223 NGFRP08138 427 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 MPLP40238 635 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 OMPP47874 163 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 ESRRGP62508 458 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 ST3GAL3Q11203 375 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 GXYLT1Q4G148 440 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 C1orf94Q6P1W5 598 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 OR4D9Q8NGE8 314 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 SH3YL1Q96HL8 342 aaPredicted RBP12.61□□□□□ -0.39
HCFC2-202ENST00000544223 GFM1Q96RP9 751 aaKnown RBP12.61□□□□□ -0.39
HCFC2-202ENST00000544223 COPS4Q9BT78 406 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 DUSP21Q9H596 190 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 DNAJB12Q9NXW2 375 aaKnown RBP12.61□□□□□ -0.39
HCFC2-202ENST00000544223 TUBA8Q9NY65 449 aaPredicted RBP12.61□□□□□ -0.39
HCFC2-202ENST00000544223 LNP1A1A4G5 178 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 C2orf72A6NCS6 295 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 EFCAB7A8K855 629 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 ZGLP1P0C6A0 271 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 CCDC159P0C7I6 412 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 ITIH1P19827 911 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 MAKP20794 623 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 CCR4P51679 360 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 NR0B1P51843 470 aaKnown RBP12.61□□□□□ -0.39
HCFC2-202ENST00000544223 SF3A2Q15428 464 aaKnown RBP12.61□□□□□ -0.39
HCFC2-202ENST00000544223 GTF2IRD2BQ6EKJ0 949 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 GTF2IRD2Q86UP8 949 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 SNX5Q9Y5X3 404 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 FRYQ5TBA9 3013 aa12.61□□□□□ -0.39
HCFC2-202ENST00000544223 RIF1Q5UIP0 2472 aaKnown RBP12.61□□□□□ -0.39
HCFC2-202ENST00000544223 SDK2Q58EX2 2172 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 TCRBV16S1A1N1A0A5B0 115 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 ZNF354AO60765 605 aaPredicted RBP12.6□□□□□ -0.39
HCFC2-202ENST00000544223 PSMB9P28065 219 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 MAGEA8P43361 318 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 CDC42P60953 191 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 NKAIN1Q4KMZ8 207 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 ZCCHC12Q6PEW1 402 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 SLC23A3Q6PIS1 610 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 HSDL2Q6YN16 418 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 SHFQ7M4L6 423 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 YTHDF1Q9BYJ9 559 aaKnown RBP12.6□□□□□ -0.39
HCFC2-202ENST00000544223 EPB41L1Q9H4G0 881 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 SCN3BQ9NY72 215 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 COMMD3-BMI1R4GMX3 469 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 TRAV27A0A087WT01 109 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 A0A1W2PPW3 197 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 IDSB3KWA1 339 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 H3BMQ9 156 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 KHNYNO15037 678 aaKnown RBP12.6□□□□□ -0.39
HCFC2-202ENST00000544223 RGS10O43665 173 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 OXSR1O95747 527 aaPredicted RBP12.6□□□□□ -0.39
HCFC2-202ENST00000544223 IGKV3-11P04433 115 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 THBS1P07996 1170 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 CKMT1AP12532 417 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 ACAA2P42765 397 aaKnown RBP12.6□□□□□ -0.39
HCFC2-202ENST00000544223 NUP107P57740 925 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 SMIM11AP58511 58 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 ST3GAL4Q11206 333 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 ILKQ13418 452 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 PEAR1Q5VY43 1037 aaPredicted RBP12.6□□□□□ -0.39
HCFC2-202ENST00000544223 SMARCD3Q6STE5 483 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 RANBP3LQ86VV4 465 aaPredicted RBP12.6□□□□□ -0.39
HCFC2-202ENST00000544223 OR13F1Q8NGS4 319 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 HOXB13Q92826 284 aaPredicted RBP12.6□□□□□ -0.39
HCFC2-202ENST00000544223 OTULINQ96BN8 352 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 COG8Q96MW5 612 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 PSD2Q9BQI7 771 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 MEPEQ9NQ76 525 aaPredicted RBP12.6□□□□□ -0.39
HCFC2-202ENST00000544223 RARRES3Q9UL19 164 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 BLOC1S6Q9UL45 172 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 CARD8Q9Y2G2 431 aa12.6□□□□□ -0.39
HCFC2-202ENST00000544223 CNOT1A5YKK6 2376 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms