RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 HLA-FP30511 346 aa11.85□□□□□ -0.51
SMG8-202ENST00000543872 FGL1Q08830 312 aa11.85□□□□□ -0.51
SMG8-202ENST00000543872 SLBPQ14493 270 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMG8-202ENST00000543872 SLC25A30Q5SVS4 291 aa11.85□□□□□ -0.51
SMG8-202ENST00000543872 HAGHLQ6PII5 290 aaPredicted RBP11.85□□□□□ -0.51
SMG8-202ENST00000543872 IKBIPQ70UQ0 350 aa11.85□□□□□ -0.51
SMG8-202ENST00000543872 C2orf73Q8N5S3 287 aaPredicted RBP11.85□□□□□ -0.51
SMG8-202ENST00000543872 SORCS1Q8WY21 1168 aa11.85□□□□□ -0.51
SMG8-202ENST00000543872 WNT2BQ93097 391 aa11.85□□□□□ -0.51
SMG8-202ENST00000543872 WBP2Q969T9 261 aa11.85□□□□□ -0.51
SMG8-202ENST00000543872 TREX2Q9BQ50 279 aaPredicted RBP11.85□□□□□ -0.51
SMG8-202ENST00000543872 SLC6A5Q9Y345 797 aa11.85□□□□□ -0.51
SMG8-202ENST00000543872 IRAK3Q9Y616 596 aa11.85□□□□□ -0.51
SMG8-202ENST00000543872 CHD5Q8TDI0 1954 aa11.85□□□□□ -0.51
SMG8-202ENST00000543872 A0A087WUU8 490 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 GFYI3L273 518 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 TBL1XO60907 577 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 EFNB1P98172 346 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 PITPNAQ00169 270 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 SERTAD2Q14140 314 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 NDUFA9Q16795 377 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 SLC6A19Q695T7 634 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 BPIFCQ8NFQ6 507 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 OR10K1Q8NGX5 313 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 OR5W2Q8NH69 310 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 NSMAFQ92636 917 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 KLK6Q92876 244 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 FGF11Q92914 225 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 ARMC5Q96C12 935 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 ALG8Q9BVK2 526 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 QRSL1Q9H0R6 528 aaKnown RBP11.84□□□□□ -0.51
SMG8-202ENST00000543872 BRF2Q9HAW0 419 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 STOX2Q9P2F5 926 aaPredicted RBP11.84□□□□□ -0.51
SMG8-202ENST00000543872 PURGQ9UJV8 347 aaKnown RBP11.84□□□□□ -0.51
SMG8-202ENST00000543872 PCDHB8Q9UN66 801 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 CA5BQ9Y2D0 317 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 A0A0C4DFX4 3053 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 DAPL1A0PJW8 107 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 J3QLW9 94 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 SNAPINO95295 136 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 RLN2P04090 185 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 ZNF19P17023 458 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 CCND3P30281 292 aaPredicted RBP11.84□□□□□ -0.51
SMG8-202ENST00000543872 GPR4P46093 362 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 CCR9P51686 369 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 TAS2R41P59536 307 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 RAP2BP61225 183 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 SSTP61278 116 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 HFEQ30201 348 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 PAN3Q58A45 887 aaKnown RBP11.84□□□□□ -0.51
SMG8-202ENST00000543872 PABPC1L2AQ5JQF8 200 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 TMEM99Q8N816 258 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 ZNF740Q8NDX6 193 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 EXOSC8Q96B26 276 aaKnown RBP11.84□□□□□ -0.51
SMG8-202ENST00000543872 DNTTIP1Q9H147 329 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 HRASLSQ9HDD0 168 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 MED9Q9NWA0 146 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 TAAR2Q9P1P5 351 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 PADI3Q9ULW8 664 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 AK6Q9Y3D8 172 aaKnown RBP11.84□□□□□ -0.51
SMG8-202ENST00000543872 PPP2R3BQ9Y5P8 575 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 TRPV2Q9Y5S1 764 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 A0A0G2JPF8 293 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 A0A1W2PRQ8 180 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 SERTM1A2A2V5 107 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 HNRNPCL3B7ZW38 293 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 DISC1C4P0D8 188 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 HNRNPCL4P0DMR1 293 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 PPP3CBP16298 524 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 ATF1P18846 271 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 RAB13P51153 203 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 MMP15P51511 669 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 TNFRSF17Q02223 184 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 KLF9Q13886 244 aaPredicted RBP11.84□□□□□ -0.51
SMG8-202ENST00000543872 COL9A2Q14055 689 aaPredicted RBP11.84□□□□□ -0.51
SMG8-202ENST00000543872 C1orf94Q6P1W5 598 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 ACBD7Q8N6N7 88 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 POGLUT1Q8NBL1 392 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 OR5T2Q8NGG2 359 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 OR4Q3Q8NH05 313 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 ABHD4Q8TB40 342 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 KCTD12Q96CX2 325 aaKnown RBP11.84□□□□□ -0.51
SMG8-202ENST00000543872 TSNAXQ99598 290 aaKnown RBP11.84□□□□□ -0.51
SMG8-202ENST00000543872 MAN2C1Q9NTJ4 1040 aa11.84□□□□□ -0.51
SMG8-202ENST00000543872 CPSF4LA6NMK7 179 aaKnown RBP11.83□□□□□ -0.52
SMG8-202ENST00000543872 KDM4EB2RXH2 506 aaPredicted RBP11.83□□□□□ -0.52
SMG8-202ENST00000543872 GPR31O00270 319 aa11.83□□□□□ -0.52
SMG8-202ENST00000543872 TO15178 435 aa11.83□□□□□ -0.52
SMG8-202ENST00000543872 EIF3GO75821 320 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMG8-202ENST00000543872 TGM6O95932 706 aa11.83□□□□□ -0.52
SMG8-202ENST00000543872 ACAA1P09110 424 aaPredicted RBP11.83□□□□□ -0.52
SMG8-202ENST00000543872 ZNF3P17036 446 aa11.83□□□□□ -0.52
SMG8-202ENST00000543872 HSD3B2P26439 372 aa11.83□□□□□ -0.52
SMG8-202ENST00000543872 KCNJ3P48549 501 aa11.83□□□□□ -0.52
SMG8-202ENST00000543872 MRPL58Q14197 206 aaKnown RBP11.83□□□□□ -0.52
SMG8-202ENST00000543872 FAM71E1Q6IPT2 247 aa11.83□□□□□ -0.52
SMG8-202ENST00000543872 PLBD1Q6P4A8 553 aa11.83□□□□□ -0.52
SMG8-202ENST00000543872 CRTC1Q6UUV9 634 aa11.83□□□□□ -0.52
SMG8-202ENST00000543872 CXXC5Q7LFL8 322 aaKnown RBP11.83□□□□□ -0.52
SMG8-202ENST00000543872 ZNF565Q8N9K5 539 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms