RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	CD300A	Q9UGN4	299 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	KCNE5	Q9UJ90	142 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	WIF1	Q9Y5W5	379 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	CNTRL	Q7Z7A1	2325 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545		A0A1W2PQD3	144 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	CLDN24	A6NM45	220 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	FAM166B	A8MTA8	275 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	FAM47E-STBD1	D6RA91	191 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	SNPH	O15079	494 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	GSC2	O15499	205 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	TRAPPC6A	O75865	159 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	NUDT14	O95848	222 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	PABPC4L	P0CB38	370 aa	Known RBP	9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	UBTFL6	P0CB48	400 aa	Predicted RBP	9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	UBL4A	P11441	157 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	GGT1	P19440	569 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	PTGDS	P41222	190 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	PPIA	P62937	165 aa	Known RBP	9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	BNIP2	Q12982	314 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	INPP5J	Q15735	1006 aa	Predicted RBP	9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	CD226	Q15762	336 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	ZSCAN26	Q16670	478 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	NDUFAF6	Q330K2	333 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	TIGD3	Q6B0B8	471 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	CCDC80	Q76M96	950 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	PLCZ1	Q86YW0	608 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	B4GALNT2	Q8NHY0	566 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	OIT3	Q8WWZ8	545 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	LZIC	Q8WZA0	190 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	TAMM41	Q96BW9	452 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	TMEM41A	Q96HV5	264 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	TPD52L3	Q96J77	140 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	CADM1	Q9BY67	442 aa	Known RBP	9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	RTN4R	Q9BZR6	473 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	PCDHAC1	Q9H158	963 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	LRMDA	Q9H2I8	198 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	DSN1	Q9H410	356 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	PROK2	Q9HC23	129 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	ZFP64	Q9NPA5	681 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	RLIM	Q9NVW2	624 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	ADPRHL2	Q9NX46	363 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	KLHL28	Q9NXS3	571 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	MED11	Q9P086	117 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	B4GALT7	Q9UBV7	327 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	MAGEL2	Q9UJ55	1249 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	ZNF443	Q9Y2A4	671 aa	Predicted RBP	9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	SLC35A3	Q9Y2D2	325 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	CARD8	Q9Y2G2	431 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	PCDHGB6	Q9Y5F9	930 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	SNX13	Q9Y5W8	968 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	GPC6	Q9Y625	555 aa	Predicted RBP	9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	DSPP	Q9NZW4	1301 aa		9.28	□□□□□ -0.92
CPSF7-221	ENST00000543545	CACNA1G	O43497	2377 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	PINLYP	A6NC86	204 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	ERICH4	A6NGS2	130 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	TTLL8	A6PVC2	850 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	ACOT7	O00154	380 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	ZNF264	O43296	627 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	SUV39H1	O43463	412 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	EIF4E2	O60573	245 aa	Known RBP	9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	TRIM3	O75382	744 aa	Predicted RBP	9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	GCM2	O75603	506 aa	Predicted RBP	9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	SORBS2	O94875	1100 aa	Known RBP	9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	MFN2	O95140	757 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	ZNF682	O95780	498 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	SERPINA1	P01009	418 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	THBS1	P07996	1170 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	NID1	P14543	1247 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	TCEA1	P23193	301 aa	Known RBP	9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	ELAVL4	P26378	380 aa	Known RBP	9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	PRKAR1B	P31321	381 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	RYK	P34925	604 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	GAS1	P54826	345 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	PCBP3	P57721	371 aa	Known RBP	9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	PMP22	Q01453	160 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	DMTN	Q08495	405 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	NFATC3	Q12968	1075 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	FGFBP1	Q14512	234 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	ZSWIM7	Q19AV6	140 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	EIPR1	Q53HC9	387 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	CYBRD1	Q53TN4	286 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	MRPL2	Q5T653	305 aa	Known RBP	9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	AP1AR	Q63HQ0	302 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	TMEM81	Q6P7N7	255 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	PCSK4	Q6UW60	755 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	ZNF836	Q6ZNA1	936 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	FKBP9P1	Q75LS8	142 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	SLC22A16	Q86VW1	577 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	DHFR2	Q86XF0	187 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	CMIP	Q8IY22	773 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	ULK2	Q8IYT8	1036 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	CLIP4	Q8N3C7	705 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	CISD2	Q8N5K1	135 aa	Known RBP	9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	WDSUB1	Q8N9V3	476 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	RASSF5	Q8WWW0	418 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	CNOT9	Q92600	299 aa	Known RBP	9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	PROX1	Q92786	737 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	DTNBP1	Q96EV8	351 aa		9.27	□□□□□ -0.93
CPSF7-221	ENST00000543545	LRGUK	Q96M69	825 aa		9.27	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms