RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 LIASO43766 372 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 NME6O75414 186 aaPredicted RBP4.19□□□□□ -1.74
LIMS1-214ENST00000542845 STAMBPO95630 424 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 PRB2P02812 416 aaPredicted RBP4.19□□□□□ -1.74
LIMS1-214ENST00000542845 ENO2P09104 434 aaPredicted RBP4.19□□□□□ -1.74
LIMS1-214ENST00000542845 TPM1P09493 284 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 FAM58BPP0C7Q3 252 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 DHRS4L1P0CG22 281 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 HKR1P10072 659 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 NR2F6P10588 404 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 FPR2P25090 351 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 GSTM2P28161 218 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 APOBEC3AP31941 199 aaPredicted RBP4.19□□□□□ -1.74
LIMS1-214ENST00000542845 LSP1P33241 339 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 ADMP35318 185 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 XKP51811 444 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 DVL1P1P54792 670 aaPredicted RBP4.19□□□□□ -1.74
LIMS1-214ENST00000542845 CDH15P55291 814 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 UBA52P62987 128 aaKnown RBP4.19□□□□□ -1.74
LIMS1-214ENST00000542845 EGR3Q06889 387 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 SRSF4Q08170 494 aaKnown RBP4.19□□□□□ -1.74
LIMS1-214ENST00000542845 CHIT1Q13231 466 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 TRIP10Q15642 601 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 TRIP13Q15645 432 aaPredicted RBP4.19□□□□□ -1.74
LIMS1-214ENST00000542845 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.19□□□□□ -1.74
LIMS1-214ENST00000542845 SH2D4BQ5SQS7 431 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 KHDRBS2Q5VWX1 349 aaKnown RBP4.19□□□□□ -1.74
LIMS1-214ENST00000542845 HBMQ6B0K9 141 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 TMEM81Q6P7N7 255 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 KLHL17Q6TDP4 642 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 RBM43Q6ZSC3 357 aaKnown RBP4.19□□□□□ -1.74
LIMS1-214ENST00000542845 LARP4Q71RC2 724 aaKnown RBP eCLIP4.19□□□□□ -1.74
LIMS1-214ENST00000542845 LUZP1Q86V48 1076 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 GABRG1Q8N1C3 465 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 BPIFB2Q8N4F0 458 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 METTL25Q8N6Q8 603 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 UBL4BQ8N7F7 174 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 ZDHHC22Q8N966 263 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 NUP43Q8NFH3 380 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 TOR1AIP2Q8NFQ8 470 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 OR2M3Q8NG83 312 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 OR4K14Q8NGD5 310 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 CALML6Q8TD86 181 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 DUSP19Q8WTR2 217 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 OSTF1Q92882 214 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 PTCD3Q96EY7 689 aaKnown RBP4.19□□□□□ -1.74
LIMS1-214ENST00000542845 CMTM7Q96FZ5 175 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 SERPINB12Q96P63 405 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 GBP4Q96PP9 640 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 INPP5KQ9BT40 448 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 CAPS2Q9BXY5 557 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 MS4A8Q9BY19 250 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 DDX47Q9H0S4 455 aaKnown RBP4.19□□□□□ -1.74
LIMS1-214ENST00000542845 TSPY26PQ9H489 355 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 C7orf69Q9H7B7 122 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 TMEM185BQ9H7F4 350 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 ESM1Q9NQ30 184 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 GLRX2Q9NS18 164 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 ABHD10Q9NUJ1 306 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 LMBRD1Q9NUN5 540 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 PRSS50Q9UI38 385 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 FBXL7Q9UJT9 491 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 MGAT4BQ9UQ53 548 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 GRIP1Q9Y3R0 1128 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 CADP27708 2225 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 RYR3Q15413 4870 aa4.19□□□□□ -1.74
LIMS1-214ENST00000542845 CIB4A0PJX0 185 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 SH3PXD2BA1X283 911 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 C7orf72A4D263 438 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 B4DSR2 109 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 ZNF814B7Z6K7 855 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 LYNX1G3V0Z9 82 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 PLPP1O14494 284 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 ACOX3O15254 700 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 PIN1P1O15428 100 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 CCNT2O60583 730 aaKnown RBP4.18□□□□□ -1.74
LIMS1-214ENST00000542845 PRAMEF4O60810 478 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 ERAL1O75616 437 aaKnown RBP4.18□□□□□ -1.74
LIMS1-214ENST00000542845 RAD51DO75771 328 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 PDE5AO76074 875 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 AHSGP02765 367 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 LYNX1P0DP58 116 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 DAOP14920 347 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 PORP16435 677 aaPredicted RBP4.18□□□□□ -1.74
LIMS1-214ENST00000542845 ADRA2CP18825 462 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 GGT1P19440 569 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 CD22P20273 847 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 S1PR1P21453 382 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 OMGP23515 440 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 PTAFRP25105 342 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 CD40P25942 277 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 GALNSP34059 522 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 PCGF2P35227 344 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 FEN1P39748 380 aaKnown RBP4.18□□□□□ -1.74
LIMS1-214ENST00000542845 PPICP45877 212 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 RFX3P48380 749 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 HSPA7P48741 367 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 VPS41P49754 854 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 HNMTP50135 292 aa4.18□□□□□ -1.74
LIMS1-214ENST00000542845 ARFIP2P53365 341 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms