RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 NINJ1Q92982 152 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 SLC38A4Q969I6 547 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 FKBP10Q96AY3 582 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 ARSGQ96EG1 525 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 SPSB2Q99619 263 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 CRB3Q9BUF7 120 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 GABARAPL3Q9BY60 117 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 LOXL2Q9Y4K0 774 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 A0A087WUU8 490 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 SYNDIG1LA6NDD5 238 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 FRG2CA6NGY1 282 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 NTN1O95631 604 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 THY1P04216 161 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 SMIM18P0DKX4 95 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 GSSP48637 474 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 GPR143P51810 404 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 NR0B1P51843 470 aaKnown RBP10.16□□□□□ -0.78
SCG3-202ENST00000542355 CDH15P55291 814 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 PLAURQ03405 335 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 IL18R1Q13478 541 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 KEAP1Q14145 624 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 TRAM2Q15035 370 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 ZNF141Q15928 474 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.16□□□□□ -0.78
SCG3-202ENST00000542355 CTU2Q2VPK5 515 aaKnown RBP10.16□□□□□ -0.78
SCG3-202ENST00000542355 PGBD2Q6P3X8 592 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 SLC29A4Q7RTT9 530 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 GDF7Q7Z4P5 450 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 ZER1Q7Z7L7 766 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 PRR22Q8IZ63 422 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 TSPAN14Q8NG11 270 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 OR4K5Q8NGD3 323 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 NR4A3Q92570 626 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 MR1Q95460 341 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 SLC41A3Q96GZ6 507 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 SLC26A1Q9H2B4 701 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 ADNPQ9H2P0 1102 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 LIN28AQ9H9Z2 209 aaKnown RBP10.16□□□□□ -0.78
SCG3-202ENST00000542355 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.16□□□□□ -0.78
SCG3-202ENST00000542355 AASSQ9UDR5 926 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 GTF2A1LQ9UNN4 478 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 MGAT4BQ9UQ53 548 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 B3GALT1Q9Y5Z6 326 aa10.16□□□□□ -0.78
SCG3-202ENST00000542355 CCDC88CQ9P219 2028 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 B4E171 279 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 NPIPB9F8W1W9 429 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 RFPL3O75679 317 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 CLPTM1O96005 669 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 ADAP00813 363 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 PDGFAP04085 211 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 HTR2AP28223 471 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 RYKP34925 604 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 TSPAN7P41732 249 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 DCAF7P61962 342 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 E2F1Q01094 437 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 DCAF12Q5T6F0 453 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 RRM2BQ7LG56 351 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 NKAIN4Q8IVV8 208 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 NLGN4XQ8N0W4 816 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 SETD9Q8NE22 299 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 RNF217Q8TC41 542 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 UBE2FQ969M7 185 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 C8orf44Q96CB5 159 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 ADOQ96SZ5 270 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 CDC6Q99741 560 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 APOL4Q9BPW4 351 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 UCK2Q9BZX2 261 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 STRADBQ9C0K7 418 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 WWTR1Q9GZV5 400 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 FLRT3Q9NZU0 649 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 GPN3Q9UHW5 284 aaPredicted RBP10.15□□□□□ -0.78
SCG3-202ENST00000542355 SLC7A7Q9UM01 511 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 KMT2EQ8IZD2 1858 aa10.15□□□□□ -0.78
SCG3-202ENST00000542355 A6NHS1 94 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 REM1O75628 298 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 OR5F1O95221 314 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 IL33O95760 270 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 HPGDP15428 266 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 MMP11P24347 488 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 POU1F1P28069 291 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 ETV5P41161 510 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 HTR3AP46098 478 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 UGT2B15P54855 530 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 PSMD4P55036 377 aaKnown RBP10.15□□□□□ -0.79
SCG3-202ENST00000542355 TCF15Q12870 199 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 FGFBP1Q14512 234 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 OR1Q1Q15612 314 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 KCTD21Q4G0X4 260 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 C6orf141Q5SZD1 244 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 ZNF730Q6ZMV8 503 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 RAB11FIP2Q7L804 512 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 PRICKLE2Q7Z3G6 844 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 CPEB2Q7Z5Q1 589 aaKnown RBP10.15□□□□□ -0.79
SCG3-202ENST00000542355 LSRQ86X29 649 aaPredicted RBP10.15□□□□□ -0.79
SCG3-202ENST00000542355 MEX3DQ86XN8 651 aaKnown RBP10.15□□□□□ -0.79
SCG3-202ENST00000542355 CCDC71Q8IV32 467 aaPredicted RBP10.15□□□□□ -0.79
SCG3-202ENST00000542355 PARP8Q8N3A8 854 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 GALNT6Q8NCL4 622 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 B3GNT7Q8NFL0 401 aa10.15□□□□□ -0.79
SCG3-202ENST00000542355 CNIH3Q8TBE1 160 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms