RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 TNIP2Q8NFZ5 429 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 OR5AK3PQ8NH89 298 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 ADAMTS15Q8TE58 950 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 PAQR8Q8TEZ7 354 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 SLC9A6Q92581 669 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 OMA1Q96E52 524 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 SLC35A4Q96G79 324 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 JSRP1Q96MG2 331 aaPredicted RBP7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 CCT8L2Q96SF2 557 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 SLC35A5Q9BS91 424 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 INPP5KQ9BT40 448 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 SPRR3Q9UBC9 169 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 LEF1Q9UJU2 399 aaPredicted RBP7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 MRTO4Q9UKD2 239 aaKnown RBP7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 FAF1Q9UNN5 650 aaPredicted RBP7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 OR10H1Q9Y4A9 318 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 PCDHGB3Q9Y5G1 929 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 GMEB1Q9Y692 573 aa7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 CHCHD2Q9Y6H1 151 aaPredicted RBP7.92□□□□□ -1.14
CLSTN3-212ENST00000541770 KIAA1549Q9HCM3 1950 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 MPDZO75970 2070 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 FREM3P0C091 2139 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 C15orf38-AP3S2A0A0A6YYH1 394 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 ANKRD33BA6NCL7 494 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 CLCA1A8K7I4 914 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 BBIP1A8MTZ0 92 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 EEF1E1-BLOC1S5C9J1V9 151 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 INAFM1C9JVW0 142 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 EEF1E1O43324 174 aaKnown RBP7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 HCN1O60741 890 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 KCNH1O95259 989 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 ANP32DO95626 131 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 KRT75O95678 551 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 IL33O95760 270 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 AGR2O95994 175 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 AK1P00568 194 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 IL2RAP01589 272 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 CCL3P10147 92 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 HOXB9P17482 250 aaPredicted RBP7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 CD53P19397 219 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 ENDOUP21128 410 aaKnown RBP7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 MATN1P21941 496 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 GABRA3P34903 492 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 KRT20P35900 424 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 CHI3L1P36222 383 aaPredicted RBP7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 FBXW4P57775 412 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 KCNJ2P63252 427 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 RPP38P78345 283 aaKnown RBP7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 EFR3AQ14156 821 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 DUSP5Q16690 384 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 COQ5Q5HYK3 327 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 PAGE3Q5JUK9 113 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 Q5PR19 223 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 TBCELQ5QJ74 424 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 C6orf10Q5SRN2 563 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 PRAMEF20Q5VT98 475 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 SLC22A10Q63ZE4 541 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 SLC2A7Q6PXP3 512 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 KIF18BQ86Y91 864 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 KRTAP1-3Q8IUG1 177 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 ULK2Q8IYT8 1036 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 PRR22Q8IZ63 422 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 CIARTQ8N365 385 aaPredicted RBP7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 FBXW8Q8N3Y1 598 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 DPP10Q8N608 796 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 ANKS4BQ8N8V4 417 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 NAXEQ8NCW5 288 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 OR10G3Q8NGC4 313 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 OR4N2Q8NGD1 307 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 SPATA3Q8NHX4 192 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 FAM110BQ8TC76 370 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 SPPL2AQ8TCT8 520 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 GPR151Q8TDV0 419 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 ZFP90Q8TF47 636 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 RNF138Q8WVD3 245 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 DIO2Q92813 273 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 HGDQ93099 445 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 TMBIM1Q969X1 311 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 NTNG2Q96CW9 530 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 TMCO6Q96DC7 493 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 C16orf58Q96GQ5 468 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 SLC35G5Q96KT7 338 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 Q96MF0 132 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 CCDC106Q9BWC9 280 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 BTBD2Q9BX70 525 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 PAIP1Q9H074 479 aaKnown RBP7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 MYLK2Q9H1R3 596 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 SLC6A15Q9H2J7 730 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 PLEKHF2Q9H8W4 249 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 SLC6A13Q9NSD5 602 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 BEX4Q9NWD9 120 aaPredicted RBP7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 CNIH4Q9P003 139 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 CNOT11Q9UKZ1 510 aaKnown RBP7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 ARL2BPQ9Y2Y0 163 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 NDUFAF1Q9Y375 327 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 PCDHB14Q9Y5E9 798 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 CAPN7Q9Y6W3 813 aa7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.91□□□□□ -1.14
CLSTN3-212ENST00000541770 RTTNQ86VV8 2226 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms