RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 TDP1Q9NUW8 608 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 CNOT2Q9NZN8 540 aaKnown RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 NDOR1Q9UHB4 597 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 LEF1Q9UJU2 399 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 DKKL1Q9UK85 242 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 TSPAN16Q9UKR8 245 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 PSG11Q9UQ72 335 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 BTRCQ9Y297 605 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 GPR52Q9Y2T5 361 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 PLEKHM1Q9Y4G2 1056 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 PCDHB1Q9Y5F3 818 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 CLDN16Q9Y5I7 305 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 CLCA3PQ9Y6N3 262 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 FAM208AQ9UK61 1670 aaKnown RBP4.88□□□□□ -1.63
SNHG1-218ENST00000541615 ANKRD36CQ5JPF3 1778 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 KIDINS220Q9ULH0 1771 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 CDK5RAP2Q96SN8 1893 aa4.88□□□□□ -1.63
SNHG1-218ENST00000541615 DLG5Q8TDM6 1919 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 NALCNQ8IZF0 1738 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 A0A0U1RQK1 487 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 TMEM269A0A1B0GVZ9 245 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 A0A1W2PQL4 384 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-218ENST00000541615 ZNF320A2RRD8 509 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 CDC14CA4D256 554 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 PI4KAP2A4QPH2 592 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 OR5H15A6NDH6 313 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 NAP1L6A6NFF2 107 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 OR5H1A6NKK0 313 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 GSG1L2A8MUP6 293 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 SNRPGP15A8MWD9 76 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 MAGEB17A8MXT2 336 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 M0R082 166 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 OR2J2O76002 312 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 DFFBO76075 338 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 SLCO2B1O94956 709 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 MATN4O95460 622 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 CLDN9O95484 217 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 CXCL14O95715 111 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 SLC25A27O95847 323 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 TSPAN15O95858 294 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 HIST1H2ABP04908 130 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 CLEC3BP05452 202 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 ERCC1P07992 297 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-218ENST00000541615 NPSP0C0P6 89 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 FAM86B2P0C5J1 330 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 STAG3L2P0CL84 134 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 GTF2F2P13984 249 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 ETS1P14921 441 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 RPA2P15927 270 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 PTPRAP18433 802 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 GABRB1P18505 474 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 SDC1P18827 310 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 GGT1P19440 569 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 MAKP20794 623 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 ZNF10P21506 573 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-218ENST00000541615 AGXTP21549 392 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 MSR1P21757 451 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 MPZP25189 248 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 C21orf33P30042 268 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-218ENST00000541615 KHKP50053 298 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 DGKEP52429 567 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 AGFG1P52594 562 aaKnown RBP4.87□□□□□ -1.63
SNHG1-218ENST00000541615 PITPNAQ00169 270 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 RELBQ01201 579 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 ZP2Q05996 745 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 SLC10A2Q12908 348 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-218ENST00000541615 MTAPQ13126 283 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 SLAQ13239 276 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 SKP2Q13309 424 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 GAMTQ14353 236 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 MAD2L1BPQ15013 274 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-218ENST00000541615 ABRAXAS2Q15018 415 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 JOSD1Q15040 202 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-218ENST00000541615 ARL6IP1Q15041 203 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 SURF2Q15527 256 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-218ENST00000541615 SLC9A3R2Q15599 337 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 TSNQ15631 228 aaKnown RBP4.87□□□□□ -1.63
SNHG1-218ENST00000541615 ZNF628Q5EBL2 1059 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 TFDP3Q5H9I0 405 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 C1orf141Q5JVX7 400 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 PIP5KL1Q5T9C9 394 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 RNLSQ5VYX0 342 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 ZNF57Q68EA5 555 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-218ENST00000541615 OR52W1Q6IF63 320 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 LAIR2Q6ISS4 152 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 MRNIPQ6NTE8 343 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 ALKAL1Q6UXT8 129 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 DPY19L2P2Q6ZN68 376 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 RNF165Q6ZSG1 346 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 UBE2R2Q712K3 238 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-218ENST00000541615 GAREM2Q75VX8 874 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 HIST3H2AQ7L7L0 130 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 TMPRSS7Q7RTY8 843 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 PLPPR4Q7Z2D5 763 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 ANKRD33Q7Z3H0 272 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 RD3Q7Z3Z2 195 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 TMEM135Q86UB9 458 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 SLC47A2Q86VL8 602 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 CYP4Z1Q86W10 505 aa4.87□□□□□ -1.63
SNHG1-218ENST00000541615 PARGQ86W56 976 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms