RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 OR5J2Q8NH18 312 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 RSPRY1Q96DX4 576 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC41A3Q96GZ6 507 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 RHBGQ9H310 441 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 PAK6Q9NQU5 681 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 MBNL1Q9NR56 388 aaKnown RBP9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 TMEM5Q9Y2B1 443 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 CACNG2Q9Y698 323 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 TEX13CA0A0J9YWL9 993 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZNF860A6NHJ4 632 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 LILRB3O75022 631 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC22A5O76082 557 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 REEP5Q00765 189 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 TGM3Q08188 693 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 TRAM2Q15035 370 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 MAPK14Q16539 360 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 ST3GAL2Q16842 350 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC36A2Q495M3 483 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 GXYLT1Q4G148 440 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 ESCO2Q56NI9 601 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZC3H14Q6PJT7 736 aaKnown RBP9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 TEX261Q6UWH6 196 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 RASSF6Q6ZTQ3 369 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 THAP4Q8WY91 577 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC35A4Q96G79 324 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 C4orf36Q96KX1 117 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZNF559Q9BR84 538 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 GSDMCQ9BYG8 508 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 HEXA-AS1Q9H8Q6 139 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 FKRPQ9H9S5 495 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 MRPS18AQ9NVS2 196 aaKnown RBP9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 TAS2R7Q9NYW3 318 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 GLTPQ9NZD2 209 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 H2AFY2Q9P0M6 372 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 USP36Q9P275 1121 aaKnown RBP9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZMIZ1Q9ULJ6 1067 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 U3KQ87 197 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 TSPAN11A1L157 253 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 ANKRD61A6NGH8 418 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 SGK494L7N484 410 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 RGS9O75916 674 aaPredicted RBP9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 WNT1P04628 370 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 SELENOPP49908 381 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 DHCR24Q15392 516 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 SLC25A30Q5SVS4 291 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 TIGD3Q6B0B8 471 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 IL17RCQ8NAC3 791 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR5M3Q8NGP4 307 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR5K2Q8NHB8 316 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 PXYLP1Q8TE99 480 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 INSM2Q96T92 566 aaPredicted RBP9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 FAIM2Q9BWQ8 316 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 GPR174Q9BXC1 333 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 BTBD1Q9H0C5 482 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 SCML1Q9UN30 329 aa9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 PPIEQ9UNP9 301 aaKnown RBP9.65□□□□□ -0.87
CDC42SE1-207ENST00000540998 DAPL1A0PJW8 107 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 RFPL3O75679 317 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 GATBO75879 557 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 PYCR1P32322 319 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 ATP12AP54707 1039 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 CLDN12P56749 244 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 SRSF5Q13243 272 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 NDUFA9Q16795 377 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 DUSP6Q16828 381 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 HYAL4Q2M3T9 481 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 LGALSLQ3ZCW2 172 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 TP53I3Q53FA7 332 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 MZT2AQ6P582 158 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 CHMP1BQ7LBR1 199 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 LIX1LQ8IVB5 337 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 PIAS4Q8N2W9 510 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 LRRC17Q8N6Y2 441 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF527Q8NB42 609 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR5W2Q8NH69 310 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 GRHL3Q8TE85 626 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 SETD7Q8WTS6 366 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 CREB3L1Q96BA8 519 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR52D1Q9H346 318 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 GHITMQ9H3K2 345 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 CYSLTR2Q9NS75 346 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 EIF3KQ9UBQ5 218 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 A0A0G2JK05 382 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 POM121CA8CG34 1229 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 PEX12O00623 359 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 EFCAB14O75071 495 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 FZD7O75084 574 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 CSF2RAP15509 400 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 CEBPBP17676 345 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 GSTM3P21266 225 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 PAICSP22234 425 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 AHCYP23526 432 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 HTR1FP30939 366 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 PITPNBP48739 271 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 ST8SIA6P61647 398 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 SLC9A5Q14940 896 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 STPG1Q5TH74 334 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 LILRA6Q6PI73 481 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 ACBD7Q8N6N7 88 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 GALNT6Q8NCL4 622 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms