RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 HLA-DQA1Q5Y7H0 255 aa22.6■■□□□ 1.21
TTC3-225ENST00000540756 TMEM205Q6UW68 189 aa22.6■■□□□ 1.21
TTC3-225ENST00000540756 SLC29A4Q7RTT9 530 aa22.6■■□□□ 1.21
TTC3-225ENST00000540756 ZNF441Q8N8Z8 693 aa22.6■■□□□ 1.21
TTC3-225ENST00000540756 TMEM255BQ8WV15 326 aa22.6■■□□□ 1.21
TTC3-225ENST00000540756 STRADBQ9C0K7 418 aa22.6■■□□□ 1.21
TTC3-225ENST00000540756 REV1Q9UBZ9 1251 aa22.6■■□□□ 1.21
TTC3-225ENST00000540756 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.59■■□□□ 1.21
TTC3-225ENST00000540756 KLF7O75840 302 aaPredicted RBP22.59■■□□□ 1.21
TTC3-225ENST00000540756 STK17BO94768 372 aa22.59■■□□□ 1.21
TTC3-225ENST00000540756 SOX14O95416 240 aa22.59■■□□□ 1.21
TTC3-225ENST00000540756 UMODP07911 640 aa22.59■■□□□ 1.21
TTC3-225ENST00000540756 ACAA2P42765 397 aaKnown RBP22.59■■□□□ 1.21
TTC3-225ENST00000540756 RNF4P78317 190 aa22.59■■□□□ 1.21
TTC3-225ENST00000540756 TRAM2Q15035 370 aa22.59■■□□□ 1.21
TTC3-225ENST00000540756 TMEM236Q5W0B7 351 aa22.59■■□□□ 1.21
TTC3-225ENST00000540756 WDR88Q6ZMY6 472 aa22.59■■□□□ 1.21
TTC3-225ENST00000540756 PRICKLE2Q7Z3G6 844 aa22.59■■□□□ 1.21
TTC3-225ENST00000540756 RANBP3LQ86VV4 465 aaPredicted RBP22.59■■□□□ 1.21
TTC3-225ENST00000540756 GPN3Q9UHW5 284 aaPredicted RBP22.59■■□□□ 1.21
TTC3-225ENST00000540756 PCDHGA6Q9Y5G7 932 aa22.59■■□□□ 1.21
TTC3-225ENST00000540756 ZFHX2Q9C0A1 2572 aaPredicted RBP22.59■■□□□ 1.21
TTC3-225ENST00000540756 REM1O75628 298 aa22.58■■□□□ 1.21
TTC3-225ENST00000540756 IL5RAQ01344 420 aa22.58■■□□□ 1.21
TTC3-225ENST00000540756 KEAP1Q14145 624 aa22.58■■□□□ 1.21
TTC3-225ENST00000540756 CD226Q15762 336 aa22.58■■□□□ 1.21
TTC3-225ENST00000540756 KLHL26Q53HC5 615 aa22.58■■□□□ 1.21
TTC3-225ENST00000540756 HRASLS5Q96KN8 279 aa22.58■■□□□ 1.21
TTC3-225ENST00000540756 RTN4RQ9BZR6 473 aa22.58■■□□□ 1.21
TTC3-225ENST00000540756 SEMA4CQ9C0C4 833 aa22.58■■□□□ 1.21
TTC3-225ENST00000540756 WDR54Q9H977 334 aa22.58■■□□□ 1.21
TTC3-225ENST00000540756 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.58■■□□□ 1.21
TTC3-225ENST00000540756 RIF1Q5UIP0 2472 aaKnown RBP22.58■■□□□ 1.21
TTC3-225ENST00000540756 SERINC4A6NH21 518 aa22.58■■□□□ 1.2
TTC3-225ENST00000540756 ZNF354AO60765 605 aaPredicted RBP22.58■■□□□ 1.2
TTC3-225ENST00000540756 OR5F1O95221 314 aa22.58■■□□□ 1.2
TTC3-225ENST00000540756 UTS2O95399 124 aa22.58■■□□□ 1.2
TTC3-225ENST00000540756 MT-CO3P00414 261 aa22.58■■□□□ 1.2
TTC3-225ENST00000540756 ADAP00813 363 aa22.58■■□□□ 1.2
TTC3-225ENST00000540756 ILKQ13418 452 aa22.58■■□□□ 1.2
TTC3-225ENST00000540756 SGCDQ92629 289 aa22.58■■□□□ 1.2
TTC3-225ENST00000540756 SLC38A4Q969I6 547 aa22.58■■□□□ 1.2
TTC3-225ENST00000540756 PITX2Q99697 317 aa22.58■■□□□ 1.2
TTC3-225ENST00000540756 PRSS27Q9BQR3 290 aa22.58■■□□□ 1.2
TTC3-225ENST00000540756 ARMC7Q9H6L4 198 aa22.58■■□□□ 1.2
TTC3-225ENST00000540756 MGAT4BQ9UQ53 548 aa22.58■■□□□ 1.2
TTC3-225ENST00000540756 PTRH2Q9Y3E5 179 aaKnown RBP22.58■■□□□ 1.2
TTC3-225ENST00000540756 SDK2Q58EX2 2172 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 C17orf51A8MQB3 221 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 M0R129 80 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 PIP5K1CO60331 668 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 ICOSLGO75144 302 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 LYPD3O95274 346 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 CHMP24386 653 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 POU1F1P28069 291 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 ABCD3P28288 659 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 RYKP34925 604 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 NCF4Q15080 339 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 TRIP6Q15654 476 aaKnown RBP22.57■■□□□ 1.2
TTC3-225ENST00000540756 ZNF730Q6ZMV8 503 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 TIPARPQ7Z3E1 657 aaKnown RBP22.57■■□□□ 1.2
TTC3-225ENST00000540756 PARP8Q8N3A8 854 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 LPAR4Q99677 370 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 UCK2Q9BZX2 261 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 RASSF1Q9NS23 344 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 OR6C76A6NM76 312 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 OIP5O43482 229 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 CSTAP01040 98 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 TP53P04637 393 aaPredicted RBP22.57■■□□□ 1.2
TTC3-225ENST00000540756 UGT2B15P54855 530 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 DCAF7P61962 342 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 PTGES3Q15185 160 aaKnown RBP22.57■■□□□ 1.2
TTC3-225ENST00000540756 HSDL2Q6YN16 418 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 PIP4P1Q86T03 277 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 GRAMD2AQ8IUY3 354 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 TSPAN14Q8NG11 270 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 RNF217Q8TC41 542 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 GRHL3Q8TE85 626 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 OMA1Q96E52 524 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 UBQLN4Q9NRR5 601 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 CNIH4Q9P003 139 aa22.57■■□□□ 1.2
TTC3-225ENST00000540756 AHCTF1Q8WYP5 2266 aa22.56■■□□□ 1.2
TTC3-225ENST00000540756 JMJD7P0C870 316 aa22.56■■□□□ 1.2
TTC3-225ENST00000540756 CDK5R2Q13319 367 aa22.56■■□□□ 1.2
TTC3-225ENST00000540756 IL18R1Q13478 541 aa22.56■■□□□ 1.2
TTC3-225ENST00000540756 APOFQ13790 326 aa22.56■■□□□ 1.2
TTC3-225ENST00000540756 HES3Q5TGS1 186 aa22.56■■□□□ 1.2
TTC3-225ENST00000540756 C1orf94Q6P1W5 598 aa22.56■■□□□ 1.2
TTC3-225ENST00000540756 APLFQ8IW19 511 aaPredicted RBP22.56■■□□□ 1.2
TTC3-225ENST00000540756 FBLIM1Q8WUP2 373 aa22.56■■□□□ 1.2
TTC3-225ENST00000540756 KLHDC3Q9BQ90 382 aa22.56■■□□□ 1.2
TTC3-225ENST00000540756 DGCR6LQ9BY27 220 aa22.56■■□□□ 1.2
TTC3-225ENST00000540756 ADNPQ9H2P0 1102 aa22.56■■□□□ 1.2
TTC3-225ENST00000540756 BATF3Q9NR55 127 aa22.56■■□□□ 1.2
TTC3-225ENST00000540756 TESQ9UGI8 421 aaKnown RBP22.56■■□□□ 1.2
TTC3-225ENST00000540756 PPIEQ9UNP9 301 aaKnown RBP22.56■■□□□ 1.2
TTC3-225ENST00000540756 TRBV11-1A0A0K0K1C0 115 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 TRAPPC13A5PLN9 417 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 A6NHS1 94 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 TMEM200CA6NKL6 621 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms