RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 MVDP53602 400 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 NTHL1P78549 312 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 AKIRIN2Q53H80 203 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 UQCC3Q6UW78 93 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 MOB3CQ70IA8 216 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 GOLGA7Q7Z5G4 137 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 GPSM1Q86YR5 675 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 STK40Q8N2I9 435 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 SAMD12Q8N8I0 201 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 ARL14EPQ8N8R7 260 aaPredicted RBP8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 VN1R2Q8NFZ6 395 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 OR10H5Q8NGA6 315 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 ACOT12Q8WYK0 555 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 FCRL2Q96LA5 508 aaPredicted RBP8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 OR2A7Q96R45 310 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 FXYD6Q9H0Q3 95 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 PIGMQ9H3S5 423 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 OPA3Q9H6K4 179 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 RNF122Q9H9V4 155 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 LRTM1Q9HBL6 345 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 OR12D3Q9UGF7 316 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 PLEKHA6Q9Y2H5 1048 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 MED16Q9Y2X0 877 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 PRKAB1Q9Y478 270 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 OR10H1Q9Y4A9 318 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 DOCK6Q96HP0 2047 aa8.87□□□□□ -0.99
CTNNA1-243ENST00000540387 ANKRD36A6QL64 1941 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 GREB1Q4ZG55 1949 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 PATJQ8NI35 1801 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 COLCA2A8K830 154 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 HEPACAM2A8MVW5 462 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 J3KTA2 159 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 CLDN4O14493 209 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 GASTP01350 101 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 WNT1P04628 370 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 HSD3B1P14060 373 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 SLC1A3P43003 542 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 PPT1P50897 306 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 MAT1AQ00266 395 aaKnown RBP8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 SCAPQ12770 1279 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 VEZF1Q14119 521 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 SLC30A6Q6NXT4 461 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 IKBIPQ70UQ0 350 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 NR2C2APQ86WQ0 139 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 NUDT13Q86X67 352 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 RNF113BQ8IZP6 322 aaKnown RBP8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 ARIH2OSQ8N7S6 290 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 RNASE11Q8TAA1 199 aaKnown RBP8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 EDEM2Q9BV94 578 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 TMED9Q9BVK6 235 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 REEP4Q9H6H4 257 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 KCNK12Q9HB15 430 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 TCF7L1Q9HCS4 588 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 ISYNA1Q9NPH2 558 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 RBM22Q9NW64 420 aaKnown RBP eCLIP8.86□□□□□ -0.991e-6■■■□□ 19.1
CTNNA1-243ENST00000540387 PPT2Q9UMR5 302 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 COLQQ9Y215 455 aaPredicted RBP8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 FNDC3AQ9Y2H6 1198 aaKnown RBP8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 PRRC2BQ5JSZ5 2229 aaKnown RBP8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 SPTBN5Q9NRC6 3674 aaKnown RBP8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 GABRPO00591 440 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 TCAPO15273 167 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 OIP5O43482 229 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 PRAF2O60831 178 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 UBXN7O94888 489 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 SLC34A2O95436 690 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 IGFBP1P08833 259 aaPredicted RBP8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 NFYBP25208 207 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 RPS14P62263 151 aaKnown RBP8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 DGCR2P98153 550 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 ZXDBP98169 803 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 BCL2L1Q07817 233 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 SNTB2Q13425 540 aaKnown RBP8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 KRT33BQ14525 404 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 SLC5A12Q1EHB4 618 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 CDNFQ49AH0 187 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 GPRC6AQ5T6X5 926 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 H3F3CQ6NXT2 135 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 GRASPQ7Z6J2 395 aaPredicted RBP8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 DPPA2Q7Z7J5 298 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 TCEANCQ8N8B7 351 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 FAM71CQ8NEG0 241 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 OR11G2Q8NGC1 345 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 OR6K3Q8NGY3 331 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 TCTEX1D2Q8WW35 142 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 SELENOMQ8WWX9 145 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 PIGKQ92643 395 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 WBP2Q969T9 261 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 VOPP1Q96AW1 172 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 ZC3H10Q96K80 434 aaKnown RBP8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 SOX7Q9BT81 388 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 TBC1D17Q9HA65 648 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 TAS2R13Q9NYV9 303 aa8.86□□□□□ -0.99
CTNNA1-243ENST00000540387 C5orf42Q9H799 3197 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 C5orf58C9J3I9 102 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 OPN1SWP03999 348 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 RHOP08100 348 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 C1SP09871 688 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 MPGP29372 298 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 SOX18P35713 384 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms