RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 VPS37AQ8NEZ2 397 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 ZPLD1Q8TCW7 415 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 MIPOL1Q8TD10 442 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 CKAP2Q8WWK9 683 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 NEURL3Q96EH8 262 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 SLC35A5Q9BS91 424 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 PTGES2Q9H7Z7 377 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 SDR39U1Q9NRG7 319 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-212ENST00000540230 KCNE5Q9UJ90 142 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 ZNF337Q9Y3M9 751 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 NOTCH2Q04721 2471 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 MED12LQ86YW9 2145 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 PRAMEF27A3QJZ7 478 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 MBD3L4A6NDZ8 208 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-212ENST00000540230 MBD3L3A6NE82 208 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-212ENST00000540230 MBD3L5A6NJ08 208 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-212ENST00000540230 CLCA1A8K7I4 914 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 FCMRO60667 390 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 TNFRSF21O75509 655 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 SLC22A3O75751 556 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 HPGDP15428 266 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 TIMP3P35625 211 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 SUCLG1P53597 346 aaKnown RBP13.61□□□□□ -0.23
UBE3B-212ENST00000540230 ZNF117Q03924 483 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 GSTA3Q16772 222 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 TMEM44Q2T9K0 475 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 KLHL26Q53HC5 615 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 CBLN3Q6UW01 205 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 DNAJC14Q6Y2X3 702 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-212ENST00000540230 MBD3L2Q8NHZ7 208 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-212ENST00000540230 ZNF524Q96C55 264 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 PANX1Q96RD7 426 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 ENKD1Q9H0I2 346 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 KCNJ16Q9NPI9 418 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 ZIM2Q9NZV7 527 aa13.61□□□□□ -0.23
UBE3B-212ENST00000540230 CCDC154A6NI56 674 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 H3BML4 177 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 COX6B1P14854 86 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 POU3F2P20265 443 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-212ENST00000540230 MSX1P28360 303 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 CHI3L1P36222 383 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-212ENST00000540230 AGFG1P52594 562 aaKnown RBP13.6□□□□□ -0.23
UBE3B-212ENST00000540230 ATP12AP54707 1039 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 CLDN20P56880 219 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 RCAN2Q14206 197 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 GPR68Q15743 365 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 ARHGAP11BQ3KRB8 267 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 GTDC1Q4AE62 458 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 HEPHL1Q6MZM0 1159 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 RNF130Q86XS8 419 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 MCEMP1Q8IX19 187 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 ZNF614Q8N883 585 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 GLB1L3Q8NCI6 653 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-212ENST00000540230 PNPT1Q8TCS8 783 aaKnown RBP13.6□□□□□ -0.23
UBE3B-212ENST00000540230 PHOSPHO1Q8TCT1 267 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 XAGE5Q8WWM1 108 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 ARSGQ96EG1 525 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 DTNBP1Q96EV8 351 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 THOC1Q96FV9 657 aaKnown RBP13.6□□□□□ -0.23
UBE3B-212ENST00000540230 ZBTB18Q99592 522 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 ZNF350Q9GZX5 532 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 TCF7L2Q9NQB0 619 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 MED17Q9NVC6 651 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 CLCF1Q9UBD9 225 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 MKLN1Q9UL63 735 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 HEATR5AQ86XA9 2040 aa13.6□□□□□ -0.23
UBE3B-212ENST00000540230 DUXAA6NLW8 204 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 POLR3GO15318 223 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-212ENST00000540230 SEC14L5O43304 696 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 HCRTR2O43614 444 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 TGM6O95932 706 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 CD1EP15812 388 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 IGFBP2P18065 325 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 BMP5P22003 454 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 AQP5P55064 265 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 FOXF2Q12947 444 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 PLPPR5Q32ZL2 321 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 TIGD2Q4W5G0 525 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 COX20Q5RI15 118 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 PDZK1Q5T2W1 519 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 ZNF621Q6ZSS3 439 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 HMGN2P46Q86SG4 172 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 MISPQ8IVT2 679 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 ZNF295-AS1Q8N0V1 137 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 B4GALNT2Q8NHY0 566 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 POC1BQ8TC44 478 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 SMPDL3BQ92485 455 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 VPS33AQ96AX1 596 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 MAGEB18Q96M61 343 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 TREX2Q9BQ50 279 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-212ENST00000540230 PIGQQ9BRB3 760 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 TRIM8Q9BZR9 551 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 CALHM2Q9HA72 323 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 CARD8Q9Y2G2 431 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 HSPB2A8KAH6 182 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 FAM47E-STBD1D6RA91 191 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 HMGN4O00479 90 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 UGT2B17O75795 530 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 SOX30O94993 753 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 TGDSO95455 350 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms