RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 CDKN2CP42773 168 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 LHX2P50458 406 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 HPCAP84074 193 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 SQLEQ14534 574 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 CD226Q15762 336 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 ZNF141Q15928 474 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 HSPB2Q16082 182 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 TNFAIP8L2Q6P589 184 aaPredicted RBP12.13□□□□□ -0.47
CCDC130-202ENST00000540216 GATSQ8NAP1 163 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 OR10Q1Q8NGQ4 319 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 LILRB4Q8NHJ6 448 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 B4GALNT2Q8NHY0 566 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 XAGE5Q8WWM1 108 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 ZBTB8AQ96BR9 441 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 STOML1Q9UBI4 398 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 TRIM33Q9UPN9 1127 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 LIPT1Q9Y234 373 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 UNC79Q9P2D8 2635 aa12.13□□□□□ -0.47
CCDC130-202ENST00000540216 A0A0G2JNJ9 132 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 MBD3L4A6NDZ8 208 aaPredicted RBP12.12□□□□□ -0.47
CCDC130-202ENST00000540216 MBD3L3A6NE82 208 aaPredicted RBP12.12□□□□□ -0.47
CCDC130-202ENST00000540216 MBD3L5A6NJ08 208 aaPredicted RBP12.12□□□□□ -0.47
CCDC130-202ENST00000540216 HMGN4O00479 90 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 KIAA0513O60268 411 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 ANP32DO95626 131 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 OR12D1P0DN82 309 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 POU3F2P20265 443 aaPredicted RBP12.12□□□□□ -0.47
CCDC130-202ENST00000540216 ZNF41P51814 821 aaPredicted RBP12.12□□□□□ -0.47
CCDC130-202ENST00000540216 CLDN18P56856 261 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 EEFSECP57772 596 aaKnown RBP12.12□□□□□ -0.47
CCDC130-202ENST00000540216 TMEM44Q2T9K0 475 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 C6orf10Q5SRN2 563 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC130-202ENST00000540216 BLOC1S3Q6QNY0 202 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 DNAJC14Q6Y2X3 702 aaPredicted RBP12.12□□□□□ -0.47
CCDC130-202ENST00000540216 RNF130Q86XS8 419 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 CCDC71Q8IV32 467 aaPredicted RBP12.12□□□□□ -0.47
CCDC130-202ENST00000540216 TOR1AIP2Q8NFQ8 470 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 MBD3L2Q8NHZ7 208 aaPredicted RBP12.12□□□□□ -0.47
CCDC130-202ENST00000540216 PHOSPHO1Q8TCT1 267 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 ZFP90Q8TF47 636 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 PMM1Q92871 262 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 RAB8BQ92930 207 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 VPS33AQ96AX1 596 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 ROPN1LQ96C74 230 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 TRNT1Q96Q11 434 aaKnown RBP12.12□□□□□ -0.47
CCDC130-202ENST00000540216 UCN2Q96RP3 112 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 SAP130Q9H0E3 1048 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 NPHS2Q9NP85 383 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 THUMPD1Q9NXG2 353 aaKnown RBP12.12□□□□□ -0.47
CCDC130-202ENST00000540216 Q9UFV3 132 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 WDR45Q9Y484 360 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 ARHGAP21Q5T5U3 1957 aa12.12□□□□□ -0.47
CCDC130-202ENST00000540216 MED12Q93074 2177 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 NPIPA5A0A0B4J1W7 369 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 OR2M5A3KFT3 312 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 SERINC4A6NH21 518 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 NPIPA7E9PJI5 369 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 GTPBP1O00178 669 aaKnown RBP12.11□□□□□ -0.47
CCDC130-202ENST00000540216 EIF4E2O60573 245 aaKnown RBP12.11□□□□□ -0.47
CCDC130-202ENST00000540216 FCMRO60667 390 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 IL2RAP01589 272 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 GSNP06396 782 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 NPIPA8P0DM63 369 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 TROVE2P10155 538 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCDC130-202ENST00000540216 UBL4AP11441 157 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 TCEA1P23193 301 aaKnown RBP12.11□□□□□ -0.47
CCDC130-202ENST00000540216 CEACAM8P31997 349 aaPredicted RBP12.11□□□□□ -0.47
CCDC130-202ENST00000540216 ADH7P40394 386 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 EIF1P41567 113 aaKnown RBP12.11□□□□□ -0.47
CCDC130-202ENST00000540216 P2RX1P51575 399 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 CASP9P55211 416 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 ZNF117Q03924 483 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 SRYQ05066 204 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 FUT5Q11128 374 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 CDSNQ15517 529 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 GPR68Q15743 365 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 PLPPR5Q32ZL2 321 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 SLC25A35Q3KQZ1 300 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 PDZK1Q5T2W1 519 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 METTL21CQ5VZV1 264 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 ARSKQ6UWY0 536 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 SEM1Q6ZVN7 128 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 ADGRE4PQ86SQ3 457 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 ZNF619Q8N2I2 560 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 GTPBP8Q8N3Z3 284 aaPredicted RBP12.11□□□□□ -0.47
CCDC130-202ENST00000540216 MEIOBQ8N635 442 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 ZNF614Q8N883 585 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 GTF2H4Q92759 462 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 SH3YL1Q96HL8 342 aaPredicted RBP12.11□□□□□ -0.47
CCDC130-202ENST00000540216 ZFP3Q96NJ6 502 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 TRIB1Q96RU8 372 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 TM9SF2Q99805 663 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 TUBA1CQ9BQE3 449 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 RAD21L1Q9H4I0 556 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 RUBCNLQ9H714 662 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 TPT1P8Q9HAU6 139 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 KCNJ16Q9NPI9 418 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 MRGBPQ9NV56 204 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 MED17Q9NVC6 651 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms