RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 POMT2Q9UKY4 750 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 EXOSC1Q9Y3B2 195 aaKnown RBP8.15□□□□□ -1.1
DDB1-217ENST00000540166 CSNK1G3Q9Y6M4 447 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 SPAG17Q6Q759 2223 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 COL4A4P53420 1690 aaPredicted RBP8.15□□□□□ -1.11
DDB1-217ENST00000540166 WRBO00258 174 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 CACNB4O00305 520 aaPredicted RBP8.15□□□□□ -1.11
DDB1-217ENST00000540166 CREBL2O60519 120 aaPredicted RBP8.15□□□□□ -1.11
DDB1-217ENST00000540166 RLN2P04090 185 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 PIPP12273 146 aaPredicted RBP8.15□□□□□ -1.11
DDB1-217ENST00000540166 HOXB1P14653 301 aaPredicted RBP8.15□□□□□ -1.11
DDB1-217ENST00000540166 TACR1P25103 407 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 RBMS1P29558 406 aaKnown RBP8.15□□□□□ -1.11
DDB1-217ENST00000540166 ASMTP46597 345 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 CCR6P51684 374 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 ACVR1Q04771 509 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 STX4Q12846 297 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 HNRNPA1L2Q32P51 320 aaKnown RBP8.15□□□□□ -1.11
DDB1-217ENST00000540166 SPIN4Q56A73 249 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 METTL11BQ5VVY1 283 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 AFMIDQ63HM1 303 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 KIAA1161Q6NSJ0 714 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 SHFQ7M4L6 423 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 LRRC28Q86X40 367 aaPredicted RBP8.15□□□□□ -1.11
DDB1-217ENST00000540166 RASGRP3Q8IV61 690 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 IQCF1Q8N6M8 205 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 BOLLQ8N9W6 283 aaKnown RBP8.15□□□□□ -1.11
DDB1-217ENST00000540166 OR1M1Q8NGA1 313 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 OR11H7Q8NGC8 314 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 OR2T4Q8NH00 348 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 ZDHHC1Q8WTX9 485 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 RFKQ969G6 155 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 SLC19A3Q9BZV2 496 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 CHMP1AQ9HD42 196 aaPredicted RBP8.15□□□□□ -1.11
DDB1-217ENST00000540166 MIEF1Q9NQG6 463 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 MRPL15Q9P015 296 aaKnown RBP8.15□□□□□ -1.11
DDB1-217ENST00000540166 GPN3Q9UHW5 284 aaPredicted RBP8.15□□□□□ -1.11
DDB1-217ENST00000540166 MKL2Q9ULH7 1088 aa8.15□□□□□ -1.11
DDB1-217ENST00000540166 SLC22A23A1A5C7 686 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 J3KTA2 159 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 ADAP00813 363 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 H1F0P07305 194 aaKnown RBP8.14□□□□□ -1.11
DDB1-217ENST00000540166 ATXN8OSP0DMR3 200 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 SDC1P18827 310 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 EPORP19235 508 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 GABRA5P31644 462 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 S100A11P31949 105 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 SRP9P49458 86 aaKnown RBP8.14□□□□□ -1.11
DDB1-217ENST00000540166 TIAL1Q01085 375 aaKnown RBP eCLIP8.14□□□□□ -1.11
DDB1-217ENST00000540166 GAS6Q14393 721 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 ST3GAL2Q16842 350 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 SYTL3Q4VX76 610 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 TMEM88Q6PEY1 159 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 IL20RBQ6UXL0 311 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 BCDIN3DQ7Z5W3 292 aaKnown RBP8.14□□□□□ -1.11
DDB1-217ENST00000540166 KLHDC8BQ8IXV7 354 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 NAGSQ8N159 534 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 OR52H1Q8NGJ2 320 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 TADA1Q96BN2 335 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 CXorf58Q96LI9 332 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 CRB3Q9BUF7 120 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 XKR8Q9H6D3 395 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 RUVBL1Q9Y265 456 aaKnown RBP8.14□□□□□ -1.11
DDB1-217ENST00000540166 SLC22A14Q9Y267 594 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 DNAH12Q6ZR08 3092 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 K7EQS6 105 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 AIPO00170 330 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 ATG12O94817 140 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 CLDN7O95471 211 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 POP4O95707 220 aaKnown RBP8.14□□□□□ -1.11
DDB1-217ENST00000540166 MT-ND4P03905 459 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 ETFAP13804 333 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 IFNGR2P38484 337 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 TNFRSF17Q02223 184 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 ETFDHQ16134 617 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 ZNF628Q5EBL2 1059 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 ARSIQ5FYB1 569 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 KIAA0895LQ68EN5 471 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 ALG1LQ6GMV1 187 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 RAB12Q6IQ22 244 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 ZCCHC12Q6PEW1 402 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 EID2Q8N6I1 236 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 TMEM185AQ8NFB2 350 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 OR11H4Q8NGC9 324 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 SIGLEC11Q96RL6 698 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 MGME1Q9BQP7 344 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 C1QTNF3Q9BXJ4 246 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 TREM1Q9NP99 234 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 STOX2Q9P2F5 926 aaPredicted RBP8.14□□□□□ -1.11
DDB1-217ENST00000540166 ENPP4Q9Y6X5 453 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 DOCK8Q8NF50 2099 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 FLRT2O43155 660 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 KDELR3O43731 214 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 GASTP01350 101 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 ITGB7P26010 798 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 CD27P26842 260 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 HOXA6P31267 233 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 RAB13P51153 203 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 ARFIP1P53367 373 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 RAP2BP61225 183 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms